Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERCC2P18074 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERCC2P18074 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
ERCC2P18074 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERCC2P18074 RNVU1-8-201ENST00000364272 125 ntBASIC14.14□□□□□ -0.15
ERCC2P18074 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC14.14□□□□□ -0.15
ERCC2P18074 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC14.14□□□□□ -0.15
ERCC2P18074 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ERCC2P18074 AC093300.1-201ENST00000510368 1201 ntBASIC14.14□□□□□ -0.15
ERCC2P18074 RNA5SP417-201ENST00000516459 108 ntBASIC14.14□□□□□ -0.15
ERCC2P18074 NEU3-207ENST00000534628 746 ntTSL 2 BASIC14.14□□□□□ -0.15
ERCC2P18074 AC132812.1-201ENST00000583145 892 ntBASIC14.14□□□□□ -0.15
ERCC2P18074 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
ERCC2P18074 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.14□□□□□ -0.15
ERCC2P18074 AC025262.2-201ENST00000623975 1056 ntBASIC14.14□□□□□ -0.15
ERCC2P18074 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
ERCC2P18074 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ERCC2P18074 AC007336.3-201ENST00000623886 2160 ntBASIC14.14□□□□□ -0.15
ERCC2P18074 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
ERCC2P18074 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.14□□□□□ -0.15
ERCC2P18074 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ERCC2P18074 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERCC2P18074 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERCC2P18074 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERCC2P18074 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERCC2P18074 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.14□□□□□ -0.15
ERCC2P18074 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERCC2P18074 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERCC2P18074 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ERCC2P18074 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ERCC2P18074 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC14.14□□□□□ -0.15
ERCC2P18074 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC14.14□□□□□ -0.15
ERCC2P18074 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ERCC2P18074 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.14□□□□□ -0.15
ERCC2P18074 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERCC2P18074 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERCC2P18074 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC14.14□□□□□ -0.15
ERCC2P18074 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
ERCC2P18074 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ERCC2P18074 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ERCC2P18074 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ERCC2P18074 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ERCC2P18074 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC14.13□□□□□ -0.15
ERCC2P18074 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
ERCC2P18074 CICP8-201ENST00000455800 2813 ntBASIC14.13□□□□□ -0.15
ERCC2P18074 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC14.13□□□□□ -0.15
ERCC2P18074 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ERCC2P18074 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC14.13□□□□□ -0.15
ERCC2P18074 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ERCC2P18074 AC091046.1-201ENST00000331871 207 ntBASIC14.13□□□□□ -0.15
ERCC2P18074 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
ERCC2P18074 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ERCC2P18074 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.13□□□□□ -0.15
ERCC2P18074 PFN2-202ENST00000423691 911 ntTSL 2 BASIC14.13□□□□□ -0.15
ERCC2P18074 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
ERCC2P18074 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC14.13□□□□□ -0.15
ERCC2P18074 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.13□□□□□ -0.15
ERCC2P18074 AC025186.1-201ENST00000478174 870 ntBASIC14.13□□□□□ -0.15
ERCC2P18074 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC14.13□□□□□ -0.15
ERCC2P18074 BATF-202ENST00000555504 361 ntTSL 2 BASIC14.13□□□□□ -0.15
ERCC2P18074 AC007952.4-201ENST00000573866 637 ntBASIC14.13□□□□□ -0.15
ERCC2P18074 AC242376.2-201ENST00000619355 883 ntBASIC14.13□□□□□ -0.15
ERCC2P18074 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC14.13□□□□□ -0.15
ERCC2P18074 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ERCC2P18074 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
ERCC2P18074 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ERCC2P18074 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ERCC2P18074 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ERCC2P18074 AL513497.1-201ENST00000624273 2083 ntBASIC14.13□□□□□ -0.15
ERCC2P18074 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.13□□□□□ -0.15
ERCC2P18074 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ERCC2P18074 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ERCC2P18074 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ERCC2P18074 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ERCC2P18074 LINC00567-201ENST00000569854 3409 ntBASIC14.12□□□□□ -0.15
ERCC2P18074 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ERCC2P18074 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ERCC2P18074 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
ERCC2P18074 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ERCC2P18074 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ERCC2P18074 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ERCC2P18074 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ERCC2P18074 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
ERCC2P18074 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ERCC2P18074 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC14.12□□□□□ -0.15
ERCC2P18074 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC14.12□□□□□ -0.15
ERCC2P18074 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ERCC2P18074 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ERCC2P18074 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ERCC2P18074 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ERCC2P18074 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ERCC2P18074 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC14.12□□□□□ -0.15
ERCC2P18074 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
ERCC2P18074 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC14.12□□□□□ -0.15
ERCC2P18074 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ERCC2P18074 MAGEA5-201ENST00000446757 942 ntBASIC14.12□□□□□ -0.15
ERCC2P18074 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC14.12□□□□□ -0.15
ERCC2P18074 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC14.12□□□□□ -0.15
ERCC2P18074 BUD31-205ENST00000456893 512 ntTSL 5 BASIC14.12□□□□□ -0.15
ERCC2P18074 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms