Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.87□□□□□ -0.03
SNRPFP62306 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.87□□□□□ -0.03
SNRPFP62306 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.87□□□□□ -0.03
SNRPFP62306 AC007326.2-201ENST00000624224 7579 ntBASIC14.87□□□□□ -0.03
SNRPFP62306 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNRPFP62306 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SNRPFP62306 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC14.87□□□□□ -0.03
SNRPFP62306 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SNRPFP62306 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNRPFP62306 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNRPFP62306 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SNRPFP62306 AC006480.2-201ENST00000609770 1337 ntBASIC14.87□□□□□ -0.03
SNRPFP62306 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNRPFP62306 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNRPFP62306 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SNRPFP62306 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNRPFP62306 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC14.87□□□□□ -0.03
SNRPFP62306 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SNRPFP62306 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
SNRPFP62306 Z98257.2-202ENST00000641138 1548 ntBASIC14.87□□□□□ -0.03
SNRPFP62306 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC14.86□□□□□ -0.03
SNRPFP62306 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNRPFP62306 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SNRPFP62306 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
SNRPFP62306 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC14.86□□□□□ -0.03
SNRPFP62306 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNRPFP62306 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SNRPFP62306 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
SNRPFP62306 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SNRPFP62306 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SNRPFP62306 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNRPFP62306 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC14.86□□□□□ -0.03
SNRPFP62306 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNRPFP62306 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNRPFP62306 AC087386.2-201ENST00000623212 4637 ntBASIC14.86□□□□□ -0.03
SNRPFP62306 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNRPFP62306 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
SNRPFP62306 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNRPFP62306 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SNRPFP62306 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNRPFP62306 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SNRPFP62306 SERF2-204ENST00000402131 586 ntTSL 2 BASIC14.86□□□□□ -0.03
SNRPFP62306 LINP1-201ENST00000417112 917 ntTSL 2 BASIC14.86□□□□□ -0.03
SNRPFP62306 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SNRPFP62306 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC14.86□□□□□ -0.03
SNRPFP62306 AC098935.1-201ENST00000446057 611 ntBASIC14.86□□□□□ -0.03
SNRPFP62306 RPL35P9-201ENST00000446059 350 ntBASIC14.86□□□□□ -0.03
SNRPFP62306 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC14.86□□□□□ -0.03
SNRPFP62306 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC14.86□□□□□ -0.03
SNRPFP62306 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC14.86□□□□□ -0.03
SNRPFP62306 AC079328.1-201ENST00000560358 952 ntBASIC14.86□□□□□ -0.03
SNRPFP62306 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC14.86□□□□□ -0.03
SNRPFP62306 CES1P2-201ENST00000566467 1242 ntBASIC14.86□□□□□ -0.03
SNRPFP62306 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC14.86□□□□□ -0.03
SNRPFP62306 AC107464.3-201ENST00000609172 737 ntBASIC14.86□□□□□ -0.03
SNRPFP62306 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC14.86□□□□□ -0.03
SNRPFP62306 RBM22P2-201ENST00000393978 1814 ntBASIC14.86□□□□□ -0.03
SNRPFP62306 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SNRPFP62306 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC14.86□□□□□ -0.03
SNRPFP62306 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SNRPFP62306 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC14.86□□□□□ -0.03
SNRPFP62306 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SNRPFP62306 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNRPFP62306 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNRPFP62306 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SNRPFP62306 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
SNRPFP62306 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SNRPFP62306 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNRPFP62306 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNRPFP62306 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNRPFP62306 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNRPFP62306 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNRPFP62306 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNRPFP62306 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC14.85□□□□□ -0.03
SNRPFP62306 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SNRPFP62306 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SNRPFP62306 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNRPFP62306 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNRPFP62306 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC14.85□□□□□ -0.03
SNRPFP62306 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNRPFP62306 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SNRPFP62306 CA6-205ENST00000480186 1493 ntTSL 2 BASIC14.85□□□□□ -0.03
SNRPFP62306 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNRPFP62306 LMO1-201ENST00000335790 1279 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNRPFP62306 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SNRPFP62306 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC14.85□□□□□ -0.03
SNRPFP62306 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC14.85□□□□□ -0.03
SNRPFP62306 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC14.85□□□□□ -0.03
SNRPFP62306 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC14.85□□□□□ -0.03
SNRPFP62306 RN7SL181P-201ENST00000462921 277 ntBASIC14.85□□□□□ -0.03
SNRPFP62306 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
SNRPFP62306 CR383656.3-201ENST00000551315 183 ntBASIC14.85□□□□□ -0.03
SNRPFP62306 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC14.85□□□□□ -0.03
SNRPFP62306 COX5A-205ENST00000568517 582 ntTSL 3 BASIC14.85□□□□□ -0.03
SNRPFP62306 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC14.85□□□□□ -0.03
SNRPFP62306 AC005777.1-201ENST00000588332 187 ntBASIC14.85□□□□□ -0.03
SNRPFP62306 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
SNRPFP62306 WDR7-208ENST00000589935 544 ntTSL 4 BASIC14.85□□□□□ -0.03
SNRPFP62306 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC14.85□□□□□ -0.03
SNRPFP62306 AC016629.1-201ENST00000596579 586 ntBASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms