Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.69□□□□□ -0.38
CLDN20P56880 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN20P56880 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN20P56880 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CLDN20P56880 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN20P56880 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN20P56880 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN20P56880 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC12.69□□□□□ -0.38
CLDN20P56880 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC12.69□□□□□ -0.38
CLDN20P56880 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC12.69□□□□□ -0.38
CLDN20P56880 AC103691.2-201ENST00000618824 433 ntBASIC12.69□□□□□ -0.38
CLDN20P56880 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN20P56880 CMC2-224ENST00000630396 481 ntTSL 5 BASIC12.69□□□□□ -0.38
CLDN20P56880 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC12.69□□□□□ -0.38
CLDN20P56880 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN20P56880 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.69□□□□□ -0.38
CLDN20P56880 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN20P56880 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN20P56880 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN20P56880 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
CLDN20P56880 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN20P56880 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN20P56880 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
CLDN20P56880 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.69□□□□□ -0.38
CLDN20P56880 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN20P56880 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN20P56880 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CLDN20P56880 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN20P56880 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
CLDN20P56880 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CLDN20P56880 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC12.69□□□□□ -0.38
CLDN20P56880 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.69□□□□□ -0.38
CLDN20P56880 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN20P56880 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN20P56880 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC12.68□□□□□ -0.38
CLDN20P56880 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN20P56880 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.68□□□□□ -0.38
CLDN20P56880 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CLDN20P56880 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN20P56880 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.68□□□□□ -0.38
CLDN20P56880 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN20P56880 AL355102.3-201ENST00000554299 1678 ntBASIC12.68□□□□□ -0.38
CLDN20P56880 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN20P56880 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC12.68□□□□□ -0.38
CLDN20P56880 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN20P56880 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC12.68□□□□□ -0.38
CLDN20P56880 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN20P56880 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN20P56880 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.68□□□□□ -0.38
CLDN20P56880 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN20P56880 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CLDN20P56880 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN20P56880 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN20P56880 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN20P56880 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC12.68□□□□□ -0.38
CLDN20P56880 AP000356.3-201ENST00000382243 753 ntBASIC12.68□□□□□ -0.38
CLDN20P56880 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CLDN20P56880 AL512430.1-201ENST00000392575 860 ntBASIC12.68□□□□□ -0.38
CLDN20P56880 AL391647.1-201ENST00000395664 511 ntBASIC12.68□□□□□ -0.38
CLDN20P56880 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN20P56880 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CLDN20P56880 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC12.68□□□□□ -0.38
CLDN20P56880 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC12.68□□□□□ -0.38
CLDN20P56880 AC026316.1-201ENST00000398900 414 ntBASIC12.68□□□□□ -0.38
CLDN20P56880 AL627422.1-201ENST00000434104 580 ntBASIC12.68□□□□□ -0.38
CLDN20P56880 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC12.68□□□□□ -0.38
CLDN20P56880 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC12.68□□□□□ -0.38
CLDN20P56880 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC12.68□□□□□ -0.38
CLDN20P56880 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC12.68□□□□□ -0.38
CLDN20P56880 SLC25A15P3-201ENST00000505530 290 ntBASIC12.68□□□□□ -0.38
CLDN20P56880 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC12.68□□□□□ -0.38
CLDN20P56880 AC095040.1-201ENST00000513286 675 ntBASIC12.68□□□□□ -0.38
CLDN20P56880 CFL1-214ENST00000534769 758 ntTSL 2 BASIC12.68□□□□□ -0.38
CLDN20P56880 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC12.68□□□□□ -0.38
CLDN20P56880 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC12.68□□□□□ -0.38
CLDN20P56880 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC12.68□□□□□ -0.38
CLDN20P56880 AC009145.4-201ENST00000625119 1294 ntBASIC12.68□□□□□ -0.38
CLDN20P56880 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CLDN20P56880 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN20P56880 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN20P56880 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN20P56880 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN20P56880 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN20P56880 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CLDN20P56880 PCDHA5-203ENST00000614258 4248 ntBASIC12.68□□□□□ -0.38
CLDN20P56880 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN20P56880 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.68□□□□□ -0.38
CLDN20P56880 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN20P56880 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.68□□□□□ -0.38
CLDN20P56880 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN20P56880 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN20P56880 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN20P56880 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN20P56880 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN20P56880 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN20P56880 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN20P56880 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN20P56880 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN20P56880 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.67□□□□□ -0.38
CLDN20P56880 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms