Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
CD3DP04234 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC11.71□□□□□ -0.53
CD3DP04234 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD3DP04234 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD3DP04234 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CD3DP04234 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC11.71□□□□□ -0.53
CD3DP04234 GOLGA8O-201ENST00000509311 1997 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
CD3DP04234 C12orf56-201ENST00000333722 3936 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CD3DP04234 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD3DP04234 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD3DP04234 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CD3DP04234 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC11.71□□□□□ -0.53
CD3DP04234 USB1-202ENST00000423271 1217 ntTSL 2 BASIC11.71□□□□□ -0.53
CD3DP04234 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CD3DP04234 METTL21AP1-201ENST00000438852 635 ntBASIC11.71□□□□□ -0.53
CD3DP04234 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC11.71□□□□□ -0.53
CD3DP04234 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC11.71□□□□□ -0.53
CD3DP04234 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC11.71□□□□□ -0.53
CD3DP04234 AP001889.1-201ENST00000525414 633 ntBASIC11.71□□□□□ -0.53
CD3DP04234 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC11.71□□□□□ -0.53
CD3DP04234 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD3DP04234 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
CD3DP04234 SLC25A13-202ENST00000416240 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD3DP04234 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC11.71□□□□□ -0.53
CD3DP04234 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
CD3DP04234 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CD3DP04234 TEX35-203ENST00000367641 2377 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
CD3DP04234 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CD3DP04234 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
CD3DP04234 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC11.71□□□□□ -0.54
CD3DP04234 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CD3DP04234 NAPB-207ENST00000617876 3883 ntAPPRIS ALT1 TSL 2 BASIC11.71□□□□□ -0.54
CD3DP04234 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CD3DP04234 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC11.71□□□□□ -0.54
CD3DP04234 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CD3DP04234 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC11.71□□□□□ -0.54
CD3DP04234 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
CD3DP04234 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC11.71□□□□□ -0.54
CD3DP04234 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CD3DP04234 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
CD3DP04234 DFFB-201ENST00000338895 3105 ntTSL 2 BASIC11.71□□□□□ -0.54
CD3DP04234 FAM105A-201ENST00000274217 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CD3DP04234 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD3DP04234 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CD3DP04234 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD3DP04234 PICART1-201ENST00000499842 2533 ntTSL 2 BASIC11.7□□□□□ -0.54
CD3DP04234 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
CD3DP04234 RIPK4-202ENST00000352483 4016 ntTSL 5 BASIC11.7□□□□□ -0.54
CD3DP04234 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD3DP04234 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
CD3DP04234 POC1B-GALNT4-202ENST00000548729 5436 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
CD3DP04234 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
CD3DP04234 CPT1C-203ENST00000392518 2910 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
CD3DP04234 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC11.7□□□□□ -0.54
CD3DP04234 AC245140.2-201ENST00000624054 1939 ntBASIC11.7□□□□□ -0.54
CD3DP04234 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC11.7□□□□□ -0.54
CD3DP04234 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD3DP04234 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD3DP04234 GRIK1-206ENST00000399913 3234 ntTSL 2 BASIC11.7□□□□□ -0.54
CD3DP04234 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC11.7□□□□□ -0.54
CD3DP04234 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC11.7□□□□□ -0.54
CD3DP04234 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
CD3DP04234 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC11.7□□□□□ -0.54
CD3DP04234 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD3DP04234 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD3DP04234 LAMB3-201ENST00000356082 4055 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD3DP04234 PYGL-206ENST00000544180 2696 ntTSL 2 BASIC11.7□□□□□ -0.54
CD3DP04234 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CD3DP04234 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD3DP04234 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD3DP04234 KRT18P28-201ENST00000453838 1332 ntBASIC11.7□□□□□ -0.54
CD3DP04234 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD3DP04234 AC007336.3-201ENST00000623886 2160 ntBASIC11.7□□□□□ -0.54
CD3DP04234 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD3DP04234 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD3DP04234 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD3DP04234 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
CD3DP04234 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
CD3DP04234 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CD3DP04234 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CD3DP04234 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC11.7□□□□□ -0.54
CD3DP04234 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC11.7□□□□□ -0.54
CD3DP04234 TSPY16P-201ENST00000449843 468 ntBASIC11.7□□□□□ -0.54
CD3DP04234 SERBP1P5-201ENST00000510079 1181 ntBASIC11.7□□□□□ -0.54
CD3DP04234 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CD3DP04234 API5-211ENST00000534695 560 ntTSL 5 BASIC11.7□□□□□ -0.54
CD3DP04234 WASH4P-201ENST00000564273 1246 ntBASIC11.7□□□□□ -0.54
CD3DP04234 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC11.7□□□□□ -0.54
CD3DP04234 PPY2P-201ENST00000582808 702 ntBASIC11.7□□□□□ -0.54
CD3DP04234 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CD3DP04234 AC004233.3-201ENST00000607794 1269 ntBASIC11.7□□□□□ -0.54
CD3DP04234 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CD3DP04234 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD3DP04234 Z98259.2-201ENST00000641583 609 ntBASIC11.7□□□□□ -0.54
CD3DP04234 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD3DP04234 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC11.7□□□□□ -0.54
CD3DP04234 AC144522.1-201ENST00000625111 1658 ntBASIC11.7□□□□□ -0.54
CD3DP04234 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CD3DP04234 CACNB1-212ENST00000622445 3722 ntTSL 5 BASIC11.7□□□□□ -0.54
CD3DP04234 PLA2G4E-AS1-201ENST00000499478 2499 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms