Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.88■■□□□ 1.41
PCDHB4Q9Y5E5 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
PCDHB4Q9Y5E5 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHB4Q9Y5E5 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.88■■□□□ 1.41
PCDHB4Q9Y5E5 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHB4Q9Y5E5 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHB4Q9Y5E5 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.88■■□□□ 1.41
PCDHB4Q9Y5E5 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.88■■□□□ 1.41
PCDHB4Q9Y5E5 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.88■■□□□ 1.41
PCDHB4Q9Y5E5 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.88■■□□□ 1.41
PCDHB4Q9Y5E5 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.88■■□□□ 1.41
PCDHB4Q9Y5E5 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.88■■□□□ 1.41
PCDHB4Q9Y5E5 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
PCDHB4Q9Y5E5 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHB4Q9Y5E5 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.41
PCDHB4Q9Y5E5 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.87■■□□□ 1.41
PCDHB4Q9Y5E5 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.87■■□□□ 1.41
PCDHB4Q9Y5E5 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.87■■□□□ 1.41
PCDHB4Q9Y5E5 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHB4Q9Y5E5 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHB4Q9Y5E5 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.87■■□□□ 1.41
PCDHB4Q9Y5E5 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHB4Q9Y5E5 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.87■■□□□ 1.41
PCDHB4Q9Y5E5 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
PCDHB4Q9Y5E5 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.86■■□□□ 1.41
PCDHB4Q9Y5E5 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.86■■□□□ 1.41
PCDHB4Q9Y5E5 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
PCDHB4Q9Y5E5 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHB4Q9Y5E5 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.86■■□□□ 1.41
PCDHB4Q9Y5E5 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.86■■□□□ 1.41
PCDHB4Q9Y5E5 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHB4Q9Y5E5 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHB4Q9Y5E5 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHB4Q9Y5E5 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.86■■□□□ 1.41
PCDHB4Q9Y5E5 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHB4Q9Y5E5 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.85■■□□□ 1.41
PCDHB4Q9Y5E5 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHB4Q9Y5E5 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.85■■□□□ 1.41
PCDHB4Q9Y5E5 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHB4Q9Y5E5 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHB4Q9Y5E5 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHB4Q9Y5E5 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHB4Q9Y5E5 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.85■■□□□ 1.41
PCDHB4Q9Y5E5 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.85■■□□□ 1.41
PCDHB4Q9Y5E5 AL512631.2-201ENST00000604634 923 ntBASIC23.85■■□□□ 1.41
PCDHB4Q9Y5E5 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.85■■□□□ 1.41
PCDHB4Q9Y5E5 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.85■■□□□ 1.41
PCDHB4Q9Y5E5 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHB4Q9Y5E5 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
PCDHB4Q9Y5E5 AC068473.5-201ENST00000616428 2072 ntBASIC23.85■■□□□ 1.41
PCDHB4Q9Y5E5 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHB4Q9Y5E5 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHB4Q9Y5E5 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.84■■□□□ 1.41
PCDHB4Q9Y5E5 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHB4Q9Y5E5 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHB4Q9Y5E5 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHB4Q9Y5E5 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.84■■□□□ 1.41
PCDHB4Q9Y5E5 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHB4Q9Y5E5 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.84■■□□□ 1.41
PCDHB4Q9Y5E5 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHB4Q9Y5E5 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
PCDHB4Q9Y5E5 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.84■■□□□ 1.41
PCDHB4Q9Y5E5 DUX4L4-201ENST00000566884 1269 ntBASIC23.84■■□□□ 1.41
PCDHB4Q9Y5E5 AC131212.1-201ENST00000613771 668 ntBASIC23.84■■□□□ 1.41
PCDHB4Q9Y5E5 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
PCDHB4Q9Y5E5 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHB4Q9Y5E5 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
PCDHB4Q9Y5E5 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHB4Q9Y5E5 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.83■■□□□ 1.41
PCDHB4Q9Y5E5 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
PCDHB4Q9Y5E5 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHB4Q9Y5E5 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.83■■□□□ 1.41
PCDHB4Q9Y5E5 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.83■■□□□ 1.41
PCDHB4Q9Y5E5 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.83■■□□□ 1.41
PCDHB4Q9Y5E5 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHB4Q9Y5E5 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHB4Q9Y5E5 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.83■■□□□ 1.41
PCDHB4Q9Y5E5 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHB4Q9Y5E5 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.83■■□□□ 1.41
PCDHB4Q9Y5E5 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PCDHB4Q9Y5E5 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PCDHB4Q9Y5E5 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PCDHB4Q9Y5E5 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.82■■□□□ 1.4
PCDHB4Q9Y5E5 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB4Q9Y5E5 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.82■■□□□ 1.4
PCDHB4Q9Y5E5 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB4Q9Y5E5 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB4Q9Y5E5 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.82■■□□□ 1.4
PCDHB4Q9Y5E5 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB4Q9Y5E5 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.82■■□□□ 1.4
PCDHB4Q9Y5E5 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.82■■□□□ 1.4
PCDHB4Q9Y5E5 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.82■■□□□ 1.4
PCDHB4Q9Y5E5 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB4Q9Y5E5 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB4Q9Y5E5 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB4Q9Y5E5 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB4Q9Y5E5 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.81■■□□□ 1.4
PCDHB4Q9Y5E5 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHB4Q9Y5E5 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHB4Q9Y5E5 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms