Protein–RNA interactions for Protein: Q9UQV4

LAMP3, Lysosome-associated membrane glycoprotein 3, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3Q9UQV4 AC087623.3-201ENST00000607047 1098 ntBASIC19.3■□□□□ 0.68
LAMP3Q9UQV4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LAMP3Q9UQV4 AC141586.4-201ENST00000624558 1573 ntBASIC19.3■□□□□ 0.68
LAMP3Q9UQV4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LAMP3Q9UQV4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LAMP3Q9UQV4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LAMP3Q9UQV4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
LAMP3Q9UQV4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LAMP3Q9UQV4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LAMP3Q9UQV4 BX842568.3-201ENST00000418104 571 ntBASIC19.29■□□□□ 0.68
LAMP3Q9UQV4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.29■□□□□ 0.68
LAMP3Q9UQV4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.29■□□□□ 0.68
LAMP3Q9UQV4 pRNA.6-201ENST00000610482 90 ntBASIC19.29■□□□□ 0.68
LAMP3Q9UQV4 pRNA.5-201ENST00000612139 90 ntBASIC19.29■□□□□ 0.68
LAMP3Q9UQV4 pRNA.11-201ENST00000618423 90 ntBASIC19.29■□□□□ 0.68
LAMP3Q9UQV4 pRNA.13-201ENST00000619112 90 ntBASIC19.29■□□□□ 0.68
LAMP3Q9UQV4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LAMP3Q9UQV4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LAMP3Q9UQV4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
LAMP3Q9UQV4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LAMP3Q9UQV4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LAMP3Q9UQV4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LAMP3Q9UQV4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LAMP3Q9UQV4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LAMP3Q9UQV4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LAMP3Q9UQV4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LAMP3Q9UQV4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.28■□□□□ 0.68
LAMP3Q9UQV4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.28■□□□□ 0.68
LAMP3Q9UQV4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.28■□□□□ 0.68
LAMP3Q9UQV4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.28■□□□□ 0.68
LAMP3Q9UQV4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.28■□□□□ 0.68
LAMP3Q9UQV4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
LAMP3Q9UQV4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
LAMP3Q9UQV4 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LAMP3Q9UQV4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LAMP3Q9UQV4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LAMP3Q9UQV4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.28■□□□□ 0.68
LAMP3Q9UQV4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.27■□□□□ 0.68
LAMP3Q9UQV4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.27■□□□□ 0.68
LAMP3Q9UQV4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LAMP3Q9UQV4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LAMP3Q9UQV4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LAMP3Q9UQV4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
LAMP3Q9UQV4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LAMP3Q9UQV4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
LAMP3Q9UQV4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.27■□□□□ 0.68
LAMP3Q9UQV4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LAMP3Q9UQV4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LAMP3Q9UQV4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LAMP3Q9UQV4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LAMP3Q9UQV4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
LAMP3Q9UQV4 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LAMP3Q9UQV4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LAMP3Q9UQV4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LAMP3Q9UQV4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LAMP3Q9UQV4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
LAMP3Q9UQV4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LAMP3Q9UQV4 LINC00543-201ENST00000567234 1845 ntBASIC19.26■□□□□ 0.67
LAMP3Q9UQV4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LAMP3Q9UQV4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LAMP3Q9UQV4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
LAMP3Q9UQV4 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.26■□□□□ 0.67
LAMP3Q9UQV4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.26■□□□□ 0.67
LAMP3Q9UQV4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LAMP3Q9UQV4 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LAMP3Q9UQV4 AC133561.1-201ENST00000568600 2415 ntBASIC19.25■□□□□ 0.67
LAMP3Q9UQV4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LAMP3Q9UQV4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
LAMP3Q9UQV4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
LAMP3Q9UQV4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.25■□□□□ 0.67
LAMP3Q9UQV4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LAMP3Q9UQV4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
LAMP3Q9UQV4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.25■□□□□ 0.67
LAMP3Q9UQV4 AC126544.1-201ENST00000580842 1059 ntBASIC19.25■□□□□ 0.67
LAMP3Q9UQV4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LAMP3Q9UQV4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
LAMP3Q9UQV4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LAMP3Q9UQV4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.24■□□□□ 0.67
LAMP3Q9UQV4 AL162430.1-201ENST00000480705 870 ntBASIC19.24■□□□□ 0.67
LAMP3Q9UQV4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.24■□□□□ 0.67
LAMP3Q9UQV4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LAMP3Q9UQV4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LAMP3Q9UQV4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LAMP3Q9UQV4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LAMP3Q9UQV4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LAMP3Q9UQV4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.23■□□□□ 0.67
LAMP3Q9UQV4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LAMP3Q9UQV4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LAMP3Q9UQV4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
LAMP3Q9UQV4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LAMP3Q9UQV4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
LAMP3Q9UQV4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.23■□□□□ 0.67
LAMP3Q9UQV4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LAMP3Q9UQV4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.23■□□□□ 0.67
LAMP3Q9UQV4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.23■□□□□ 0.67
LAMP3Q9UQV4 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LAMP3Q9UQV4 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LAMP3Q9UQV4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.23■□□□□ 0.67
LAMP3Q9UQV4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.23■□□□□ 0.67
LAMP3Q9UQV4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 242.1 ms