Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
NCDNQ9UBB6 KRT18P61-201ENST00000585825 1298 ntBASIC22.27■■□□□ 1.16
NCDNQ9UBB6 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NCDNQ9UBB6 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.27■■□□□ 1.16
NCDNQ9UBB6 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
NCDNQ9UBB6 AC091060.1-201ENST00000623524 1766 ntBASIC22.26■■□□□ 1.15
NCDNQ9UBB6 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NCDNQ9UBB6 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.26■■□□□ 1.15
NCDNQ9UBB6 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
NCDNQ9UBB6 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NCDNQ9UBB6 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
NCDNQ9UBB6 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.26■■□□□ 1.15
NCDNQ9UBB6 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.26■■□□□ 1.15
NCDNQ9UBB6 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.26■■□□□ 1.15
NCDNQ9UBB6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC22.26■■□□□ 1.15
NCDNQ9UBB6 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
NCDNQ9UBB6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.26■■□□□ 1.15
NCDNQ9UBB6 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NCDNQ9UBB6 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NCDNQ9UBB6 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
NCDNQ9UBB6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.25■■□□□ 1.15
NCDNQ9UBB6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NCDNQ9UBB6 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NCDNQ9UBB6 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NCDNQ9UBB6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
NCDNQ9UBB6 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC22.25■■□□□ 1.15
NCDNQ9UBB6 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
NCDNQ9UBB6 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC22.25■■□□□ 1.15
NCDNQ9UBB6 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
NCDNQ9UBB6 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
NCDNQ9UBB6 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.24■■□□□ 1.15
NCDNQ9UBB6 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.24■■□□□ 1.15
NCDNQ9UBB6 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC22.24■■□□□ 1.15
NCDNQ9UBB6 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
NCDNQ9UBB6 AC133637.1-201ENST00000624115 1537 ntBASIC22.24■■□□□ 1.15
NCDNQ9UBB6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.24■■□□□ 1.15
NCDNQ9UBB6 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NCDNQ9UBB6 AC093827.2-201ENST00000512654 315 ntBASIC22.23■■□□□ 1.15
NCDNQ9UBB6 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.23■■□□□ 1.15
NCDNQ9UBB6 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.23■■□□□ 1.15
NCDNQ9UBB6 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NCDNQ9UBB6 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NCDNQ9UBB6 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NCDNQ9UBB6 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NCDNQ9UBB6 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NCDNQ9UBB6 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
NCDNQ9UBB6 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NCDNQ9UBB6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC22.22■■□□□ 1.15
NCDNQ9UBB6 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC22.22■■□□□ 1.15
NCDNQ9UBB6 WWOX-218ENST00000627394 894 ntTSL 5 BASIC22.22■■□□□ 1.15
NCDNQ9UBB6 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
NCDNQ9UBB6 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NCDNQ9UBB6 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC22.21■■□□□ 1.15
NCDNQ9UBB6 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
NCDNQ9UBB6 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.2■■□□□ 1.15
NCDNQ9UBB6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.2■■□□□ 1.15
NCDNQ9UBB6 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NCDNQ9UBB6 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NCDNQ9UBB6 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NCDNQ9UBB6 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NCDNQ9UBB6 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC22.2■■□□□ 1.14
NCDNQ9UBB6 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC22.2■■□□□ 1.14
NCDNQ9UBB6 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.2■■□□□ 1.14
NCDNQ9UBB6 KRT18P6-201ENST00000555540 1265 ntBASIC22.2■■□□□ 1.14
NCDNQ9UBB6 AC010525.1-201ENST00000585559 441 ntBASIC22.2■■□□□ 1.14
NCDNQ9UBB6 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NCDNQ9UBB6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NCDNQ9UBB6 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NCDNQ9UBB6 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.19■■□□□ 1.14
NCDNQ9UBB6 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.19■■□□□ 1.14
NCDNQ9UBB6 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NCDNQ9UBB6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
NCDNQ9UBB6 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
NCDNQ9UBB6 MFF-208ENST00000409616 1247 ntTSL 5 BASIC22.19■■□□□ 1.14
NCDNQ9UBB6 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
NCDNQ9UBB6 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.19■■□□□ 1.14
NCDNQ9UBB6 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
NCDNQ9UBB6 FAM201B-201ENST00000458407 597 ntBASIC22.19■■□□□ 1.14
NCDNQ9UBB6 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.19■■□□□ 1.14
NCDNQ9UBB6 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.19■■□□□ 1.14
NCDNQ9UBB6 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NCDNQ9UBB6 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.19■■□□□ 1.14
NCDNQ9UBB6 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.19■■□□□ 1.14
NCDNQ9UBB6 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
NCDNQ9UBB6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.18■■□□□ 1.14
NCDNQ9UBB6 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NCDNQ9UBB6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NCDNQ9UBB6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.18■■□□□ 1.14
NCDNQ9UBB6 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
NCDNQ9UBB6 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
NCDNQ9UBB6 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
NCDNQ9UBB6 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
NCDNQ9UBB6 KRT19P1-201ENST00000405746 1186 ntBASIC22.18■■□□□ 1.14
NCDNQ9UBB6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.18■■□□□ 1.14
NCDNQ9UBB6 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.18■■□□□ 1.14
NCDNQ9UBB6 DET1-205ENST00000558413 583 ntTSL 4 BASIC22.18■■□□□ 1.14
NCDNQ9UBB6 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.18■■□□□ 1.14
NCDNQ9UBB6 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
NCDNQ9UBB6 MDK-213ENST00000617138 635 ntTSL 2 BASIC22.18■■□□□ 1.14
NCDNQ9UBB6 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms