Protein–RNA interactions for Protein: Q9H3R1

NDST4, Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDST4Q9H3R1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.33■■□□□ 1.49
NDST4Q9H3R1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC24.33■■□□□ 1.49
NDST4Q9H3R1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
NDST4Q9H3R1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.33■■□□□ 1.49
NDST4Q9H3R1 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
NDST4Q9H3R1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC24.33■■□□□ 1.48
NDST4Q9H3R1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.33■■□□□ 1.48
NDST4Q9H3R1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
NDST4Q9H3R1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
NDST4Q9H3R1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NDST4Q9H3R1 ESRRAP2-201ENST00000418437 1549 ntBASIC24.32■■□□□ 1.48
NDST4Q9H3R1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC24.32■■□□□ 1.48
NDST4Q9H3R1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC24.32■■□□□ 1.48
NDST4Q9H3R1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC24.32■■□□□ 1.48
NDST4Q9H3R1 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC24.32■■□□□ 1.48
NDST4Q9H3R1 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NDST4Q9H3R1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
NDST4Q9H3R1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC24.32■■□□□ 1.48
NDST4Q9H3R1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NDST4Q9H3R1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
NDST4Q9H3R1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
NDST4Q9H3R1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
NDST4Q9H3R1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC24.32■■□□□ 1.48
NDST4Q9H3R1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
NDST4Q9H3R1 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
NDST4Q9H3R1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
NDST4Q9H3R1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
NDST4Q9H3R1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
NDST4Q9H3R1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NDST4Q9H3R1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC24.3■■□□□ 1.48
NDST4Q9H3R1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
NDST4Q9H3R1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NDST4Q9H3R1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
NDST4Q9H3R1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC24.3■■□□□ 1.48
NDST4Q9H3R1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC24.3■■□□□ 1.48
NDST4Q9H3R1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.3■■□□□ 1.48
NDST4Q9H3R1 AC092028.1-203ENST00000608262 953 ntBASIC24.3■■□□□ 1.48
NDST4Q9H3R1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.3■■□□□ 1.48
NDST4Q9H3R1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
NDST4Q9H3R1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
NDST4Q9H3R1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NDST4Q9H3R1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NDST4Q9H3R1 ECEL1P1-201ENST00000373592 1742 ntBASIC24.3■■□□□ 1.48
NDST4Q9H3R1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC24.29■■□□□ 1.48
NDST4Q9H3R1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.29■■□□□ 1.48
NDST4Q9H3R1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.29■■□□□ 1.48
NDST4Q9H3R1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
NDST4Q9H3R1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
NDST4Q9H3R1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
NDST4Q9H3R1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
NDST4Q9H3R1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC24.29■■□□□ 1.48
NDST4Q9H3R1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
NDST4Q9H3R1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
NDST4Q9H3R1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC24.29■■□□□ 1.48
NDST4Q9H3R1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
NDST4Q9H3R1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
NDST4Q9H3R1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
NDST4Q9H3R1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
NDST4Q9H3R1 LINC00526-201ENST00000581067 1875 ntBASIC24.28■■□□□ 1.48
NDST4Q9H3R1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
NDST4Q9H3R1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.28■■□□□ 1.48
NDST4Q9H3R1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
NDST4Q9H3R1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.28■■□□□ 1.48
NDST4Q9H3R1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.28■■□□□ 1.48
NDST4Q9H3R1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
NDST4Q9H3R1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
NDST4Q9H3R1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
NDST4Q9H3R1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC24.28■■□□□ 1.48
NDST4Q9H3R1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
NDST4Q9H3R1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
NDST4Q9H3R1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
NDST4Q9H3R1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
NDST4Q9H3R1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
NDST4Q9H3R1 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
NDST4Q9H3R1 Z92544.1-202ENST00000571933 1220 ntBASIC24.27■■□□□ 1.48
NDST4Q9H3R1 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC24.27■■□□□ 1.48
NDST4Q9H3R1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.27■■□□□ 1.48
NDST4Q9H3R1 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
NDST4Q9H3R1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
NDST4Q9H3R1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
NDST4Q9H3R1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
NDST4Q9H3R1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
NDST4Q9H3R1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
NDST4Q9H3R1 RARRES2P1-201ENST00000474487 481 ntBASIC24.26■■□□□ 1.47
NDST4Q9H3R1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
NDST4Q9H3R1 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC24.26■■□□□ 1.47
NDST4Q9H3R1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
NDST4Q9H3R1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
NDST4Q9H3R1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
NDST4Q9H3R1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
NDST4Q9H3R1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
NDST4Q9H3R1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
NDST4Q9H3R1 LINC01529-204ENST00000636474 1715 ntBASIC24.25■■□□□ 1.47
NDST4Q9H3R1 KRT125P-201ENST00000546827 989 ntBASIC24.25■■□□□ 1.47
NDST4Q9H3R1 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
NDST4Q9H3R1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC24.25■■□□□ 1.47
NDST4Q9H3R1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
NDST4Q9H3R1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC24.25■■□□□ 1.47
NDST4Q9H3R1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
NDST4Q9H3R1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms