Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 NAMPT-204ENST00000417537 300 ntTSL 410.77□□□□□ -0.693e-7■■■■■ 32.4
XRN2Q9H0D6 LEMD1-209ENST00000625854 516 ntTSL 410.77□□□□□ -0.699e-6■■■■■ 32.4
XRN2Q9H0D6 AP2A1-201ENST00000354293 3388 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.695e-6■■■■■ 32.4
XRN2Q9H0D6 ZNHIT3-209ENST00000620324 834 ntTSL 2 BASIC10.75□□□□□ -0.699e-6■■■■■ 32.4
XRN2Q9H0D6 PRKAA1-203ENST00000397006 425 ntTSL 310.66□□□□□ -0.71e-10■■■■■ 32.4
XRN2Q9H0D6 CANT1-202ENST00000392446 3252 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.719e-6■■■■■ 32.4
XRN2Q9H0D6 IK-201ENST00000417647 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.739e-6■■■■■ 32.4
XRN2Q9H0D6 PPM1A-202ENST00000325658 4125 ntTSL 1 (best) BASIC10.51□□□□□ -0.731e-6■■■■■ 32.4
XRN2Q9H0D6 MYL5-205ENST00000505477 584 ntTSL 3 BASIC10.45□□□□□ -0.749e-6■■■■■ 32.4
XRN2Q9H0D6 FKBP11-207ENST00000549084 517 ntTSL 310.44□□□□□ -0.749e-6■■■■■ 32.4
XRN2Q9H0D6 LRBA-211ENST00000513021 568 ntTSL 410.38□□□□□ -0.759e-6■■■■■ 32.4
XRN2Q9H0D6 TPT1-AS1-218ENST00000523445 856 ntTSL 5 BASIC10.36□□□□□ -0.759e-6■■■■■ 32.4
XRN2Q9H0D6 AC073610.3-201ENST00000398092 939 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.769e-6■■■■■ 32.4
XRN2Q9H0D6 TXNDC5-202ENST00000460138 2704 ntTSL 210.2□□□□□ -0.789e-6■■■■■ 32.4
XRN2Q9H0D6 TNS3-204ENST00000428457 5070 ntTSL 1 (best)10.13□□□□□ -0.799e-6■■■■■ 32.4
XRN2Q9H0D6 BCR-214ENST00000487679 231 ntTSL 1 (best)10.08□□□□□ -0.89e-6■■■■■ 32.4
XRN2Q9H0D6 STRIP1-202ENST00000369796 3125 ntTSL 2 BASIC10.04□□□□□ -0.85e-6■■■■■ 32.4
XRN2Q9H0D6 NRBP1-207ENST00000486701 813 ntTSL 310.02□□□□□ -0.819e-6■■■■■ 32.4
XRN2Q9H0D6 TOX4-211ENST00000613005 3633 ntTSL 210.02□□□□□ -0.819e-6■■■■■ 32.4
XRN2Q9H0D6 SMARCC2-209ENST00000550164 4114 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.819e-6■■■■■ 32.4
XRN2Q9H0D6 TPT1-AS1-214ENST00000521507 665 ntTSL 5 BASIC9.98□□□□□ -0.819e-6■■■■■ 32.4
XRN2Q9H0D6 TIMP2-202ENST00000536189 3415 ntTSL 2 BASIC9.96□□□□□ -0.829e-6■■■■■ 32.4
XRN2Q9H0D6 ANKMY1-211ENST00000407275 252 ntTSL 39.95□□□□□ -0.829e-6■■■■■ 32.4
XRN2Q9H0D6 ATF3-206ENST00000366987 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.821e-7■■■■■ 32.4
XRN2Q9H0D6 STX12-201ENST00000373943 3079 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.839e-6■■■■■ 32.4
XRN2Q9H0D6 HNRNPL-205ENST00000595804 588 ntTSL 29.83□□□□□ -0.841e-10■■■■■ 32.4
XRN2Q9H0D6 ZNHIT3-210ENST00000620863 881 ntTSL 29.78□□□□□ -0.849e-6■■■■■ 32.4
XRN2Q9H0D6 ZNHIT3-204ENST00000617429 951 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.849e-6■■■■■ 32.4
XRN2Q9H0D6 SVIL-203ENST00000375400 6729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.859e-6■■■■■ 32.4
XRN2Q9H0D6 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC9.76□□□□□ -0.859e-6■■■■■ 32.4
XRN2Q9H0D6 ATF3-205ENST00000366985 516 ntTSL 59.73□□□□□ -0.851e-7■■■■■ 32.4
XRN2Q9H0D6 TOX4-203ENST00000448790 4534 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.879e-6■■■■■ 32.4
XRN2Q9H0D6 TOX4-212ENST00000613569 4711 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.879e-6■■■■■ 32.4
XRN2Q9H0D6 PRKAA1-206ENST00000506652 1082 ntTSL 59.6□□□□□ -0.871e-10■■■■■ 32.4
XRN2Q9H0D6 AC011450.1-201ENST00000602554 511 ntTSL 29.56□□□□□ -0.889e-6■■■■■ 32.4
XRN2Q9H0D6 NAMPT-212ENST00000489732 1976 ntTSL 29.55□□□□□ -0.883e-7■■■■■ 32.4
XRN2Q9H0D6 SOD2-216ENST00000546260 4302 ntTSL 59.54□□□□□ -0.889e-6■■■■■ 32.4
XRN2Q9H0D6 BCR-205ENST00000436990 4188 ntTSL 29.53□□□□□ -0.889e-6■■■■■ 32.4
XRN2Q9H0D6 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC9.52□□□□□ -0.899e-6■■■■■ 32.4
XRN2Q9H0D6 RASSF4-201ENST00000340258 3641 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.899e-6■■■■■ 32.4
XRN2Q9H0D6 MGAT4B-206ENST00000518867 732 ntTSL 59.45□□□□□ -0.99e-6■■■■■ 32.4
XRN2Q9H0D6 TRAF3-209ENST00000560463 701 ntTSL 39.39□□□□□ -0.915e-6■■■■■ 32.4
XRN2Q9H0D6 PPM1A-206ENST00000531143 1546 ntTSL 1 (best)9.33□□□□□ -0.921e-6■■■■■ 32.4
XRN2Q9H0D6 ANK3-205ENST00000373827 7202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.939e-6■■■■■ 32.4
XRN2Q9H0D6 KIAA1958-201ENST00000337530 11775 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.949e-6■■■■■ 32.4
XRN2Q9H0D6 SMARCC2-214ENST00000552674 3730 ntTSL 29.15□□□□□ -0.949e-6■■■■■ 32.4
XRN2Q9H0D6 ZNHIT3-212ENST00000622312 567 ntTSL 48.95□□□□□ -0.989e-6■■■■■ 32.4
XRN2Q9H0D6 ZNHIT3-203ENST00000616269 616 ntTSL 38.79□□□□□ -19e-6■■■■■ 32.4
XRN2Q9H0D6 MGAT4B-207ENST00000518980 983 ntTSL 58.69□□□□□ -1.029e-6■■■■■ 32.4
XRN2Q9H0D6 AFF1-211ENST00000544085 3644 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.021e-6■■■■■ 32.4
XRN2Q9H0D6 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC8.54□□□□□ -1.049e-6■■■■■ 32.4
XRN2Q9H0D6 AZIN1-202ENST00000347770 2857 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.051e-6■■■■■ 32.4
XRN2Q9H0D6 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC8.33□□□□□ -1.089e-6■■■■■ 32.4
XRN2Q9H0D6 UBA52-203ENST00000594527 357 ntTSL 38.24□□□□□ -1.099e-6■■■■■ 32.4
XRN2Q9H0D6 MXI1-209ENST00000484030 838 ntTSL 58.2□□□□□ -1.19e-6■■■■■ 32.4
XRN2Q9H0D6 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.119e-6■■■■■ 32.4
XRN2Q9H0D6 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC8.1□□□□□ -1.119e-6■■■■■ 32.4
XRN2Q9H0D6 NCL-206ENST00000454824 606 ntTSL 37.98□□□□□ -1.131e-10■■■■■ 32.4
XRN2Q9H0D6 NCL-203ENST00000417652 568 ntTSL 47.98□□□□□ -1.131e-10■■■■■ 32.4
XRN2Q9H0D6 ATF3-203ENST00000366981 680 ntTSL 1 (best)7.82□□□□□ -1.161e-7■■■■■ 32.4
XRN2Q9H0D6 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.189e-6■■■■■ 32.4
XRN2Q9H0D6 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.199e-6■■■■■ 32.4
XRN2Q9H0D6 UBA52-206ENST00000596272 508 ntTSL 27.61□□□□□ -1.199e-6■■■■■ 32.4
XRN2Q9H0D6 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.54□□□□□ -1.29e-6■■■■■ 32.4
XRN2Q9H0D6 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC7.5□□□□□ -1.211e-10■■■■■ 32.4
XRN2Q9H0D6 TFPI-206ENST00000420747 685 ntTSL 37.46□□□□□ -1.221e-10■■■■■ 32.4
XRN2Q9H0D6 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC7.36□□□□□ -1.239e-6■■■■■ 32.4
XRN2Q9H0D6 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.259e-6■■■■■ 32.4
XRN2Q9H0D6 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.269e-6■■■■■ 32.4
XRN2Q9H0D6 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.97□□□□□ -1.299e-6■■■■■ 32.4
XRN2Q9H0D6 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.39e-6■■■■■ 32.4
XRN2Q9H0D6 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.74□□□□□ -1.339e-6■■■■■ 32.4
XRN2Q9H0D6 LRBA-207ENST00000509835 5578 ntTSL 1 (best)6.73□□□□□ -1.339e-6■■■■■ 32.4
XRN2Q9H0D6 SRC-209ENST00000489153 551 ntTSL 36.7□□□□□ -1.349e-6■■■■■ 32.4
XRN2Q9H0D6 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.359e-6■■■■■ 32.4
XRN2Q9H0D6 LRBA-203ENST00000503716 3712 ntTSL 1 (best)6.25□□□□□ -1.419e-6■■■■■ 32.4
XRN2Q9H0D6 IK-209ENST00000515592 1964 ntTSL 26.18□□□□□ -1.429e-6■■■■■ 32.4
XRN2Q9H0D6 SEC63-202ENST00000429168 647 ntTSL 56.13□□□□□ -1.439e-6■■■■■ 32.4
XRN2Q9H0D6 SEC63-209ENST00000484803 724 ntTSL 26.13□□□□□ -1.439e-6■■■■■ 32.4
XRN2Q9H0D6 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.439e-6■■■■■ 32.4
XRN2Q9H0D6 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.09□□□□□ -1.431e-10■■■■■ 32.4
XRN2Q9H0D6 PPM1A-208ENST00000532036 1561 ntTSL 55.89□□□□□ -1.471e-6■■■■■ 32.4
XRN2Q9H0D6 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.491e-10■■■■■ 32.4
XRN2Q9H0D6 NAMPT-211ENST00000489358 581 ntTSL 35.59□□□□□ -1.513e-7■■■■■ 32.4
XRN2Q9H0D6 TFPI-209ENST00000437725 545 ntTSL 45.57□□□□□ -1.521e-10■■■■■ 32.4
XRN2Q9H0D6 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.539e-6■■■■■ 32.4
XRN2Q9H0D6 NCL-204ENST00000436894 562 ntTSL 45.45□□□□□ -1.541e-10■■■■■ 32.4
XRN2Q9H0D6 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.45□□□□□ -1.543e-7■■■■■ 32.4
XRN2Q9H0D6 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC5.42□□□□□ -1.541e-10■■■■■ 32.4
XRN2Q9H0D6 PRKAA1-207ENST00000509874 692 ntTSL 45.33□□□□□ -1.561e-10■■■■■ 32.4
XRN2Q9H0D6 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.569e-6■■■■■ 32.4
XRN2Q9H0D6 TFPI-210ENST00000453013 733 ntTSL 25.26□□□□□ -1.571e-10■■■■■ 32.4
XRN2Q9H0D6 CTSH-212ENST00000530929 479 ntTSL 35.14□□□□□ -1.599e-6■■■■■ 32.4
XRN2Q9H0D6 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.599e-6■■■■■ 32.4
XRN2Q9H0D6 THOC7-202ENST00000464327 459 ntTSL 54.91□□□□□ -1.624e-7■■■■■ 32.4
XRN2Q9H0D6 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.8□□□□□ -1.649e-6■■■■■ 32.4
XRN2Q9H0D6 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.71e-10■■■■■ 32.4
XRN2Q9H0D6 NAMPT-210ENST00000486949 1115 ntTSL 24.34□□□□□ -1.713e-7■■■■■ 32.4
XRN2Q9H0D6 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.729e-6■■■■■ 32.4
XRN2Q9H0D6 ARGLU1-201ENST00000360629 361 ntTSL 24.27□□□□□ -1.739e-6■■■■■ 32.4
Retrieved 100 of 21,068 protein–RNA pairs in 458.2 ms