RNA–Protein interactions for RNA: ENST00000296800.4

PRKAA1-201, Transcript of protein kinase AMP-activated catalytic subunit alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PRKAA1, Length 1,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAA1-201ENST00000296800 AEBP2Q6ZN18 517 aaPredicted RBP32.64■■■□□ 2.82
PRKAA1-201ENST00000296800 CHIC1Q5VXU3 224 aa30.57■■■□□ 2.48
PRKAA1-201ENST00000296800 SENP3Q9H4L4 574 aaPredicted RBP27.83■■■□□ 2.05
PRKAA1-201ENST00000296800 PHF23Q9BUL5 403 aaPredicted RBP27.45■■□□□ 1.98
PRKAA1-201ENST00000296800 FOXD1Q16676 465 aa26.03■■□□□ 1.76
PRKAA1-201ENST00000296800 POTEDQ86YR6 584 aa24.57■■□□□ 1.52
PRKAA1-201ENST00000296800 MSH5O43196 834 aa24.44■■□□□ 1.5
PRKAA1-201ENST00000296800 PLPPR3Q6T4P5 718 aa24.23■■□□□ 1.47
PRKAA1-201ENST00000296800 PIAS4Q8N2W9 510 aaPredicted RBP24.23■■□□□ 1.47
PRKAA1-201ENST00000296800 PPP6R1Q9UPN7 881 aa24.09■■□□□ 1.45
PRKAA1-201ENST00000296800 ADRA2BP18089 450 aa23.99■■□□□ 1.43
PRKAA1-201ENST00000296800 MAPK8IP2Q13387 824 aaPredicted RBP22.17■■□□□ 1.14
PRKAA1-201ENST00000296800 DMRT2Q9Y5R5 561 aa22.02■■□□□ 1.12
PRKAA1-201ENST00000296800 SCAF1Q9H7N4 1312 aaKnown RBP21.83■■□□□ 1.09
PRKAA1-201ENST00000296800 CACNB1Q02641 598 aaPredicted RBP21.26■□□□□ 0.99
PRKAA1-201ENST00000296800 PPP4R3CPQ6ZMV5 832 aa21.23■□□□□ 0.99
PRKAA1-201ENST00000296800 DCAF8L1A6NGE4 600 aa21.2■□□□□ 0.98
PRKAA1-201ENST00000296800 HOXD11P31277 338 aaPredicted RBP21.04■□□□□ 0.96
PRKAA1-201ENST00000296800 CNKSR2Q8WXI2 1034 aa20.88■□□□□ 0.93
PRKAA1-201ENST00000296800 RNF39Q9H2S5 420 aa20.86■□□□□ 0.93
PRKAA1-201ENST00000296800 RNF216Q9NWF9 866 aaPredicted RBP20.78■□□□□ 0.92
PRKAA1-201ENST00000296800 C1QBPQ07021 282 aaKnown RBP20.49■□□□□ 0.87
PRKAA1-201ENST00000296800 DNAJC5BQ9UF47 199 aa20.32■□□□□ 0.84
PRKAA1-201ENST00000296800 NCBP3Q53F19 620 aaKnown RBP20.24■□□□□ 0.83
PRKAA1-201ENST00000296800 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.09■□□□□ 0.815e-11■■■□□ 16.3
PRKAA1-201ENST00000296800 NPM3O75607 178 aaKnown RBP20.01■□□□□ 0.79
PRKAA1-201ENST00000296800 U3KPZ7 1027 aaPredicted RBP19.63■□□□□ 0.73
PRKAA1-201ENST00000296800 SPINK5Q9NQ38 1064 aaPredicted RBP19.5■□□□□ 0.71
PRKAA1-201ENST00000296800 CAPN15O75808 1086 aa19.45■□□□□ 0.7
PRKAA1-201ENST00000296800 KCNA4P22459 653 aa19.42■□□□□ 0.7
PRKAA1-201ENST00000296800 DSG3P32926 999 aa19.42■□□□□ 0.7
PRKAA1-201ENST00000296800 SLC4A2P04920 1241 aa19.22■□□□□ 0.67
PRKAA1-201ENST00000296800 POTEHQ6S545 545 aa19.17■□□□□ 0.66
PRKAA1-201ENST00000296800 TRHP20396 242 aaPredicted RBP19.07■□□□□ 0.64
PRKAA1-201ENST00000296800 ABCB7O75027 752 aa19.01■□□□□ 0.63
PRKAA1-201ENST00000296800 APLP2Q06481 763 aa18.94■□□□□ 0.62
PRKAA1-201ENST00000296800 ZNF219Q9P2Y4 722 aaPredicted RBP18.94■□□□□ 0.62
PRKAA1-201ENST00000296800 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.85■□□□□ 0.61
PRKAA1-201ENST00000296800 HNRNPUL2Q1KMD3 747 aaKnown RBP18.85■□□□□ 0.61
PRKAA1-201ENST00000296800 SAMD1Q6SPF0 538 aaPredicted RBP18.75■□□□□ 0.59
PRKAA1-201ENST00000296800 MYCNP04198 464 aaPredicted RBP18.48■□□□□ 0.55
PRKAA1-201ENST00000296800 RBM42Q9BTD8 480 aaKnown RBP18.47■□□□□ 0.55
PRKAA1-201ENST00000296800 POLA2Q14181 598 aa18.45■□□□□ 0.54
PRKAA1-201ENST00000296800 SLC4A1APQ9BWU0 796 aaKnown RBP18.35■□□□□ 0.53
PRKAA1-201ENST00000296800 CHRDL2Q6WN34 429 aa18.28■□□□□ 0.52
PRKAA1-201ENST00000296800 ATF5Q9Y2D1 282 aaPredicted RBP18.17■□□□□ 0.5
PRKAA1-201ENST00000296800 FOXD4L1Q9NU39 408 aa18.1■□□□□ 0.49
PRKAA1-201ENST00000296800 AKT1S1Q96B36 256 aa17.99■□□□□ 0.47
PRKAA1-201ENST00000296800 ZBTB12Q9Y330 459 aaPredicted RBP17.96■□□□□ 0.47
PRKAA1-201ENST00000296800 OSCARQ8IYS5 282 aa17.9■□□□□ 0.46
PRKAA1-201ENST00000296800 REM2Q8IYK8 340 aaPredicted RBP17.86■□□□□ 0.45
PRKAA1-201ENST00000296800 ZBTB22O15209 634 aa17.85■□□□□ 0.45
PRKAA1-201ENST00000296800 PIP4P2Q8N4L2 257 aa17.78■□□□□ 0.44
PRKAA1-201ENST00000296800 SP7Q8TDD2 431 aaPredicted RBP17.78■□□□□ 0.44
PRKAA1-201ENST00000296800 PITPNM1O00562 1244 aa17.69■□□□□ 0.42
PRKAA1-201ENST00000296800 FXR2P51116 673 aaKnown RBP eCLIP17.58■□□□□ 0.4
PRKAA1-201ENST00000296800 HAX1O00165 279 aa17.56■□□□□ 0.4
PRKAA1-201ENST00000296800 ATXN8OSP0DMR3 200 aa17.56■□□□□ 0.4
PRKAA1-201ENST00000296800 SPDYE2BA6NHP3 402 aa17.41■□□□□ 0.38
PRKAA1-201ENST00000296800 SPDYE6P0CI01 402 aa17.41■□□□□ 0.38
PRKAA1-201ENST00000296800 SPDYE2Q495Y8 402 aa17.41■□□□□ 0.38
PRKAA1-201ENST00000296800 FBLN2P98095 1184 aa17.4■□□□□ 0.38
PRKAA1-201ENST00000296800 EVX2Q03828 476 aa17.36■□□□□ 0.37
PRKAA1-201ENST00000296800 MKRN4PQ13434 485 aaPredicted RBP17.29■□□□□ 0.36
PRKAA1-201ENST00000296800 CLEC11AQ9Y240 323 aa17.25■□□□□ 0.35
PRKAA1-201ENST00000296800 PRKAR2AP13861 404 aaKnown RBP17.23■□□□□ 0.35
PRKAA1-201ENST00000296800 SPDYE1Q8NFV5 336 aaPredicted RBP17.21■□□□□ 0.35
PRKAA1-201ENST00000296800 ZNF692Q9BU19 519 aaPredicted RBP17.18■□□□□ 0.34
PRKAA1-201ENST00000296800 SSUH2Q9Y2M2 353 aa17.15■□□□□ 0.34
PRKAA1-201ENST00000296800 CSRNP3Q8WYN3 585 aa17.1■□□□□ 0.33
PRKAA1-201ENST00000296800 C19orf67A6NJJ6 358 aa17.04■□□□□ 0.32
PRKAA1-201ENST00000296800 CHADLQ6NUI6 762 aa16.99■□□□□ 0.31
PRKAA1-201ENST00000296800 PABPN1Q86U42 306 aaKnown RBP eCLIP16.92■□□□□ 0.3
PRKAA1-201ENST00000296800 GABBR2O75899 941 aa16.9■□□□□ 0.3
PRKAA1-201ENST00000296800 PRR29P0C7W0 189 aa16.88■□□□□ 0.29
PRKAA1-201ENST00000296800 EHMT2Q96KQ7 1210 aa16.88■□□□□ 0.29
PRKAA1-201ENST00000296800 LHX8Q68G74 356 aa16.69■□□□□ 0.26
PRKAA1-201ENST00000296800 CD44P16070 742 aaKnown RBP16.65■□□□□ 0.26
PRKAA1-201ENST00000296800 FARP1Q9Y4F1 1045 aaPredicted RBP16.65■□□□□ 0.26
PRKAA1-201ENST00000296800 POTEIP0CG38 1075 aa16.57■□□□□ 0.24
PRKAA1-201ENST00000296800 CREBZFQ9NS37 354 aa16.39■□□□□ 0.21
PRKAA1-201ENST00000296800 CLCN6P51797 869 aa16.38■□□□□ 0.21
PRKAA1-201ENST00000296800 ZRANB1Q9UGI0 708 aa16.36■□□□□ 0.21
PRKAA1-201ENST00000296800 ZNF579Q8NAF0 562 aaKnown RBP16.35■□□□□ 0.21
PRKAA1-201ENST00000296800 DCBLD2Q96PD2 775 aa16.35■□□□□ 0.21
PRKAA1-201ENST00000296800 STAG3Q9UJ98 1225 aa16.3■□□□□ 0.2
PRKAA1-201ENST00000296800 SPDYE4A6NLX3 237 aa16.25■□□□□ 0.19
PRKAA1-201ENST00000296800 GALR2O43603 387 aaPredicted RBP16.23■□□□□ 0.19
PRKAA1-201ENST00000296800 PHF12Q96QT6 1004 aa16.13■□□□□ 0.17
PRKAA1-201ENST00000296800 PAK3O75914 559 aaPredicted RBP16.1■□□□□ 0.17
PRKAA1-201ENST00000296800 MNX1P50219 401 aaPredicted RBP16.06■□□□□ 0.16
PRKAA1-201ENST00000296800 POTEB2H3BUK9 544 aa16.03■□□□□ 0.16
PRKAA1-201ENST00000296800 NPM1P06748 294 aaKnown RBP eCLIP16.03■□□□□ 0.16
PRKAA1-201ENST00000296800 OTUD5Q96G74 571 aa16.02■□□□□ 0.16
PRKAA1-201ENST00000296800 NISCHQ9Y2I1 1504 aa16■□□□□ 0.15
PRKAA1-201ENST00000296800 PELP1Q8IZL8 1130 aaKnown RBP15.97■□□□□ 0.15
PRKAA1-201ENST00000296800 PLSCR2Q9NRY7 297 aa15.96■□□□□ 0.15
PRKAA1-201ENST00000296800 MS4A3Q96HJ5 214 aa15.89■□□□□ 0.13
PRKAA1-201ENST00000296800 PROM2Q8N271 834 aa15.86■□□□□ 0.13
PRKAA1-201ENST00000296800 ASTLQ6HA08 431 aaPredicted RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms