RNA–Protein interactions for RNA: ENST00000428457.1

TNS3-204, Transcript of tensin 3, humanhuman

TSL 1 (best)

Gene TNS3, Length 5,070 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNS3-204ENST00000428457 DCAF8L2P0C7V8 631 aa17.38■□□□□ 0.37
TNS3-204ENST00000428457 NISCHQ9Y2I1 1504 aa16.99■□□□□ 0.31
TNS3-204ENST00000428457 SUPT5HO00267 1087 aaKnown RBP16.33■□□□□ 0.2
TNS3-204ENST00000428457 SHROOM4Q9ULL8 1493 aa15.96■□□□□ 0.15
TNS3-204ENST00000428457 FAM9AQ8IZU1 332 aaPredicted RBP15.91■□□□□ 0.14
TNS3-204ENST00000428457 EHMT2Q96KQ7 1210 aa15.87■□□□□ 0.13
TNS3-204ENST00000428457 PCGF6Q9BYE7 350 aa15.83■□□□□ 0.12
TNS3-204ENST00000428457 PELP1Q8IZL8 1130 aaKnown RBP15.75■□□□□ 0.11
TNS3-204ENST00000428457 APLP2Q06481 763 aa15.49■□□□□ 0.07
TNS3-204ENST00000428457 CENPBP07199 599 aaPredicted RBP15.45■□□□□ 0.06
TNS3-204ENST00000428457 TTBK1Q5TCY1 1321 aaPredicted RBP15.42■□□□□ 0.06
TNS3-204ENST00000428457 MYT1Q01538 1121 aa15.35■□□□□ 0.05
TNS3-204ENST00000428457 ZEB1P37275 1124 aaPredicted RBP15.31■□□□□ 0.04
TNS3-204ENST00000428457 HRCP23327 699 aa15.25■□□□□ 0.03
TNS3-204ENST00000428457 CCER1Q8TC90 406 aaPredicted RBP15.24■□□□□ 0.03
TNS3-204ENST00000428457 YTHDC1Q96MU7 727 aaKnown RBP15.24■□□□□ 0.03
TNS3-204ENST00000428457 ERICH6Q7L0X2 663 aa15.24■□□□□ 0.03
TNS3-204ENST00000428457 PPARGC1BQ86YN6 1023 aaKnown RBP15.11■□□□□ 0.01
TNS3-204ENST00000428457 TRIM41Q8WV44 630 aa14.97□□□□□ -0.01
TNS3-204ENST00000428457 ABCC9O60706 1549 aa14.96□□□□□ -0.01
TNS3-204ENST00000428457 TRIM26Q12899 539 aaPredicted RBP14.95□□□□□ -0.02
TNS3-204ENST00000428457 ATP1B4Q9UN42 357 aaPredicted RBP14.94□□□□□ -0.02
TNS3-204ENST00000428457 RANGAP1P46060 587 aaPredicted RBP14.93□□□□□ -0.02
TNS3-204ENST00000428457 NEFLP07196 543 aa14.9□□□□□ -0.02
TNS3-204ENST00000428457 UBTFP17480 764 aaKnown RBP14.84□□□□□ -0.03
TNS3-204ENST00000428457 LOC105371045A0A1W2PR82 267 aa14.8□□□□□ -0.04
TNS3-204ENST00000428457 MYT1LQ9UL68 1186 aa14.69□□□□□ -0.06
TNS3-204ENST00000428457 PABPN1Q86U42 306 aaKnown RBP eCLIP14.68□□□□□ -0.06
TNS3-204ENST00000428457 CHIC1Q5VXU3 224 aa14.68□□□□□ -0.06
TNS3-204ENST00000428457 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.65□□□□□ -0.06
TNS3-204ENST00000428457 HNRNPUL2Q1KMD3 747 aaKnown RBP14.65□□□□□ -0.06
TNS3-204ENST00000428457 GTF3C3Q9Y5Q9 886 aa14.63□□□□□ -0.07
TNS3-204ENST00000428457 DIEXFQ68CQ4 756 aaKnown RBP14.62□□□□□ -0.07
TNS3-204ENST00000428457 ITGAEP38570 1179 aa14.42□□□□□ -0.1
TNS3-204ENST00000428457 BCANQ96GW7 911 aa14.42□□□□□ -0.1
TNS3-204ENST00000428457 ACIN1Q9UKV3 1341 aaKnown RBP14.39□□□□□ -0.11
TNS3-204ENST00000428457 DAXXQ9UER7 740 aaPredicted RBP14.37□□□□□ -0.11
TNS3-204ENST00000428457 CNGB1Q14028 1251 aaPredicted RBP14.33□□□□□ -0.11
TNS3-204ENST00000428457 RTL5Q5HYW3 569 aaPredicted RBP14.33□□□□□ -0.12
TNS3-204ENST00000428457 FBLN2P98095 1184 aa14.31□□□□□ -0.12
TNS3-204ENST00000428457 CCDC180Q9P1Z9 1646 aa14.29□□□□□ -0.12
TNS3-204ENST00000428457 POLR3GLQ9BT43 218 aa14.29□□□□□ -0.12
TNS3-204ENST00000428457 SCAF1Q9H7N4 1312 aaKnown RBP14.21□□□□□ -0.13
TNS3-204ENST00000428457 RB1CC1Q8TDY2 1594 aa14.21□□□□□ -0.13
TNS3-204ENST00000428457 SCRIBQ14160 1630 aa14.17□□□□□ -0.14
TNS3-204ENST00000428457 ZNF316A6NFI3 1004 aaPredicted RBP14.16□□□□□ -0.14
TNS3-204ENST00000428457 NPM1P06748 294 aaKnown RBP eCLIP14.14□□□□□ -0.15
TNS3-204ENST00000428457 NEUROD1Q13562 356 aa14.14□□□□□ -0.15
TNS3-204ENST00000428457 CDK11AQ9UQ88 783 aaPredicted RBP14.09□□□□□ -0.15
TNS3-204ENST00000428457 ZCCHC6Q5VYS8 1495 aaKnown RBP14.09□□□□□ -0.15
TNS3-204ENST00000428457 ESF1Q9H501 851 aaKnown RBP14.04□□□□□ -0.16
TNS3-204ENST00000428457 CLSPNQ9HAW4 1339 aa14.01□□□□□ -0.17
TNS3-204ENST00000428457 NACADO15069 1562 aa14□□□□□ -0.17
TNS3-204ENST00000428457 FAM50AQ14320 339 aaKnown RBP13.97□□□□□ -0.17
TNS3-204ENST00000428457 ANP32CO43423 234 aa13.97□□□□□ -0.17
TNS3-204ENST00000428457 SLC4A1APQ9BWU0 796 aaKnown RBP13.96□□□□□ -0.17
TNS3-204ENST00000428457 FKBP8Q14318 412 aa13.94□□□□□ -0.18
TNS3-204ENST00000428457 TRIM52Q96A61 297 aa13.93□□□□□ -0.18
TNS3-204ENST00000428457 EIF5BO60841 1220 aaKnown RBP13.92□□□□□ -0.18
TNS3-204ENST00000428457 CHMP7Q8WUX9 453 aaPredicted RBP13.85□□□□□ -0.19
TNS3-204ENST00000428457 NPM2Q86SE8 214 aaKnown RBP13.85□□□□□ -0.19
TNS3-204ENST00000428457 ANP32AP39687 249 aaKnown RBP13.85□□□□□ -0.19
TNS3-204ENST00000428457 DCAF1Q9Y4B6 1507 aa13.84□□□□□ -0.19
TNS3-204ENST00000428457 CSRNP3Q8WYN3 585 aa13.82□□□□□ -0.2
TNS3-204ENST00000428457 ERCC6Q03468 1493 aa13.8□□□□□ -0.2
TNS3-204ENST00000428457 NBR1Q14596 966 aa13.8□□□□□ -0.2
TNS3-204ENST00000428457 MIER1Q8N108 512 aa13.79□□□□□ -0.2
TNS3-204ENST00000428457 STAG3Q9UJ98 1225 aa13.75□□□□□ -0.21
TNS3-204ENST00000428457 ZNF777Q9ULD5 760 aaPredicted RBP13.75□□□□□ -0.21
TNS3-204ENST00000428457 P3H3Q8IVL6 736 aa13.74□□□□□ -0.21
TNS3-204ENST00000428457 ZNF326Q5BKZ1 582 aaKnown RBP13.74□□□□□ -0.21
TNS3-204ENST00000428457 BAZ1BQ9UIG0 1483 aaKnown RBP13.71□□□□□ -0.21
TNS3-204ENST00000428457 ANP32EQ9BTT0 268 aa13.71□□□□□ -0.22
TNS3-204ENST00000428457 ARID3CA6NKF2 412 aa13.7□□□□□ -0.22
TNS3-204ENST00000428457 HNRNPUQ00839 825 aaKnown RBP eCLIP13.69□□□□□ -0.22
TNS3-204ENST00000428457 DDX10Q13206 875 aaKnown RBP13.69□□□□□ -0.22
TNS3-204ENST00000428457 MYO15BQ96JP2 1530 aa13.67□□□□□ -0.22
TNS3-204ENST00000428457 NEFMP07197 916 aa13.67□□□□□ -0.22
TNS3-204ENST00000428457 IRX6P78412 446 aaPredicted RBP13.66□□□□□ -0.22
TNS3-204ENST00000428457 BCL11AQ9H165 835 aa13.61□□□□□ -0.23
TNS3-204ENST00000428457 ZBTB47Q9UFB7 747 aaPredicted RBP13.6□□□□□ -0.23
TNS3-204ENST00000428457 FAM9BQ8IZU0 186 aa13.59□□□□□ -0.23
TNS3-204ENST00000428457 RSF1Q96T23 1441 aaPredicted RBP13.58□□□□□ -0.24
TNS3-204ENST00000428457 TSPY4P0CV99 314 aa13.58□□□□□ -0.24
TNS3-204ENST00000428457 TSPY10P0CW01 314 aa13.58□□□□□ -0.24
TNS3-204ENST00000428457 CANXP27824 592 aaKnown RBP13.57□□□□□ -0.24
TNS3-204ENST00000428457 PLPPR3Q6T4P5 718 aa13.57□□□□□ -0.24
TNS3-204ENST00000428457 CHGAP10645 457 aaKnown RBP13.56□□□□□ -0.24
TNS3-204ENST00000428457 ARXQ96QS3 562 aa13.56□□□□□ -0.24
TNS3-204ENST00000428457 GLIPR1L2Q4G1C9 344 aa13.55□□□□□ -0.24
TNS3-204ENST00000428457 CCDC136Q96JN2 1154 aa13.54□□□□□ -0.24
TNS3-204ENST00000428457 PLEKHD1A6NEE1 506 aa13.53□□□□□ -0.24
TNS3-204ENST00000428457 BAZ1AQ9NRL2 1556 aaPredicted RBP13.52□□□□□ -0.24
TNS3-204ENST00000428457 HIRIP3Q9BW71 556 aaPredicted RBP13.51□□□□□ -0.25
TNS3-204ENST00000428457 SALL2Q9Y467 1007 aaPredicted RBP13.51□□□□□ -0.25
TNS3-204ENST00000428457 PDS5BQ9NTI5 1447 aa13.49□□□□□ -0.25
TNS3-204ENST00000428457 RTN4Q9NQC3 1192 aaKnown RBP13.48□□□□□ -0.25
TNS3-204ENST00000428457 EEA1Q15075 1411 aa13.48□□□□□ -0.25
TNS3-204ENST00000428457 MTUS2Q5JR59 1369 aa13.47□□□□□ -0.25
TNS3-204ENST00000428457 TONSLQ96HA7 1378 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms