Protein–RNA interactions for Protein: Q9BW83

IFT27, Intraflagellar transport protein 27 homolog, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT27Q9BW83 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
IFT27Q9BW83 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
IFT27Q9BW83 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
IFT27Q9BW83 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
IFT27Q9BW83 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.21■□□□□ 0.83
IFT27Q9BW83 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
IFT27Q9BW83 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
IFT27Q9BW83 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.21■□□□□ 0.83
IFT27Q9BW83 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.83
IFT27Q9BW83 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IFT27Q9BW83 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IFT27Q9BW83 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
IFT27Q9BW83 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IFT27Q9BW83 LINC00526-201ENST00000581067 1875 ntBASIC20.2■□□□□ 0.82
IFT27Q9BW83 AL353803.4-201ENST00000565882 1934 ntBASIC20.2■□□□□ 0.82
IFT27Q9BW83 MIR4508-201ENST00000584178 70 ntBASIC20.2■□□□□ 0.82
IFT27Q9BW83 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
IFT27Q9BW83 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IFT27Q9BW83 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IFT27Q9BW83 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IFT27Q9BW83 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
IFT27Q9BW83 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
IFT27Q9BW83 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
IFT27Q9BW83 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.19■□□□□ 0.82
IFT27Q9BW83 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.19■□□□□ 0.82
IFT27Q9BW83 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IFT27Q9BW83 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IFT27Q9BW83 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
IFT27Q9BW83 LINC00565-201ENST00000562710 2331 ntBASIC20.19■□□□□ 0.82
IFT27Q9BW83 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IFT27Q9BW83 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
IFT27Q9BW83 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
IFT27Q9BW83 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
IFT27Q9BW83 AC012354.3-201ENST00000623734 483 ntBASIC20.18■□□□□ 0.82
IFT27Q9BW83 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
IFT27Q9BW83 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.18■□□□□ 0.82
IFT27Q9BW83 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
IFT27Q9BW83 ECEL1P1-201ENST00000373592 1742 ntBASIC20.18■□□□□ 0.82
IFT27Q9BW83 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
IFT27Q9BW83 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
IFT27Q9BW83 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
IFT27Q9BW83 ESRRAP2-201ENST00000418437 1549 ntBASIC20.17■□□□□ 0.82
IFT27Q9BW83 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.17■□□□□ 0.82
IFT27Q9BW83 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.17■□□□□ 0.82
IFT27Q9BW83 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IFT27Q9BW83 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IFT27Q9BW83 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
IFT27Q9BW83 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
IFT27Q9BW83 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IFT27Q9BW83 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
IFT27Q9BW83 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.17■□□□□ 0.82
IFT27Q9BW83 AL033527.3-201ENST00000566366 1196 ntBASIC20.17■□□□□ 0.82
IFT27Q9BW83 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.17■□□□□ 0.82
IFT27Q9BW83 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.17■□□□□ 0.82
IFT27Q9BW83 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
IFT27Q9BW83 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IFT27Q9BW83 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IFT27Q9BW83 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
IFT27Q9BW83 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
IFT27Q9BW83 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.16■□□□□ 0.82
IFT27Q9BW83 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IFT27Q9BW83 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.16■□□□□ 0.82
IFT27Q9BW83 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.16■□□□□ 0.82
IFT27Q9BW83 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IFT27Q9BW83 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IFT27Q9BW83 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.16■□□□□ 0.82
IFT27Q9BW83 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.16■□□□□ 0.82
IFT27Q9BW83 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IFT27Q9BW83 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.16■□□□□ 0.82
IFT27Q9BW83 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.16■□□□□ 0.82
IFT27Q9BW83 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
IFT27Q9BW83 KRT8P33-201ENST00000508125 1423 ntBASIC20.16■□□□□ 0.82
IFT27Q9BW83 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.16■□□□□ 0.82
IFT27Q9BW83 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.16■□□□□ 0.82
IFT27Q9BW83 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IFT27Q9BW83 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
IFT27Q9BW83 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
IFT27Q9BW83 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IFT27Q9BW83 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
IFT27Q9BW83 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.15■□□□□ 0.82
IFT27Q9BW83 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
IFT27Q9BW83 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
IFT27Q9BW83 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
IFT27Q9BW83 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
IFT27Q9BW83 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
IFT27Q9BW83 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
IFT27Q9BW83 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
IFT27Q9BW83 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
IFT27Q9BW83 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
IFT27Q9BW83 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
IFT27Q9BW83 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
IFT27Q9BW83 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
IFT27Q9BW83 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.14■□□□□ 0.81
IFT27Q9BW83 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
IFT27Q9BW83 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
IFT27Q9BW83 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.14■□□□□ 0.81
IFT27Q9BW83 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
IFT27Q9BW83 YBX1P4-201ENST00000392794 808 ntBASIC20.14■□□□□ 0.81
IFT27Q9BW83 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
IFT27Q9BW83 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms