Protein–RNA interactions for Protein: Q99884

SLC6A7, Sodium-dependent proline transporter, humanhuman

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A7Q99884 LINC00526-201ENST00000581067 1875 ntBASIC19.35■□□□□ 0.69
SLC6A7Q99884 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SLC6A7Q99884 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A7Q99884 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A7Q99884 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SLC6A7Q99884 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A7Q99884 FOXO3B-201ENST00000395675 1928 ntBASIC19.34■□□□□ 0.69
SLC6A7Q99884 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A7Q99884 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A7Q99884 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.34■□□□□ 0.69
SLC6A7Q99884 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.34■□□□□ 0.69
SLC6A7Q99884 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.34■□□□□ 0.69
SLC6A7Q99884 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A7Q99884 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SLC6A7Q99884 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SLC6A7Q99884 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A7Q99884 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A7Q99884 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.33■□□□□ 0.69
SLC6A7Q99884 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC6A7Q99884 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC6A7Q99884 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.69
SLC6A7Q99884 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SLC6A7Q99884 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.33■□□□□ 0.68
SLC6A7Q99884 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.33■□□□□ 0.68
SLC6A7Q99884 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC6A7Q99884 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.33■□□□□ 0.68
SLC6A7Q99884 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC6A7Q99884 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
SLC6A7Q99884 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SLC6A7Q99884 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.32■□□□□ 0.68
SLC6A7Q99884 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
SLC6A7Q99884 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SLC6A7Q99884 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC6A7Q99884 AC092068.2-201ENST00000590491 1708 ntBASIC19.32■□□□□ 0.68
SLC6A7Q99884 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC6A7Q99884 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC6A7Q99884 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLC6A7Q99884 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC6A7Q99884 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.32■□□□□ 0.68
SLC6A7Q99884 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC6A7Q99884 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLC6A7Q99884 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC6A7Q99884 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC6A7Q99884 GUSBP5-202ENST00000510805 1989 ntBASIC19.32■□□□□ 0.68
SLC6A7Q99884 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLC6A7Q99884 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.31■□□□□ 0.68
SLC6A7Q99884 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC6A7Q99884 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC6A7Q99884 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC6A7Q99884 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.31■□□□□ 0.68
SLC6A7Q99884 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC6A7Q99884 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC6A7Q99884 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC6A7Q99884 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.31■□□□□ 0.68
SLC6A7Q99884 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SLC6A7Q99884 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.31■□□□□ 0.68
SLC6A7Q99884 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.31■□□□□ 0.68
SLC6A7Q99884 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.31■□□□□ 0.68
SLC6A7Q99884 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.31■□□□□ 0.68
SLC6A7Q99884 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.31■□□□□ 0.68
SLC6A7Q99884 AC137630.3-201ENST00000607245 391 ntBASIC19.31■□□□□ 0.68
SLC6A7Q99884 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC6A7Q99884 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC6A7Q99884 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC6A7Q99884 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC6A7Q99884 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC6A7Q99884 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC6A7Q99884 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC6A7Q99884 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC6A7Q99884 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC6A7Q99884 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC6A7Q99884 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SLC6A7Q99884 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC6A7Q99884 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SLC6A7Q99884 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SLC6A7Q99884 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC6A7Q99884 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC6A7Q99884 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.3■□□□□ 0.68
SLC6A7Q99884 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC6A7Q99884 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
SLC6A7Q99884 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC6A7Q99884 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC6A7Q99884 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC6A7Q99884 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC6A7Q99884 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC6A7Q99884 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC6A7Q99884 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC6A7Q99884 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.29■□□□□ 0.68
SLC6A7Q99884 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
SLC6A7Q99884 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC6A7Q99884 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC6A7Q99884 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC6A7Q99884 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC6A7Q99884 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC6A7Q99884 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC6A7Q99884 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC6A7Q99884 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC6A7Q99884 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC6A7Q99884 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC6A7Q99884 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms