Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP1S3Q96PC3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
AP1S3Q96PC3 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
AP1S3Q96PC3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
AP1S3Q96PC3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
AP1S3Q96PC3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP1S3Q96PC3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP1S3Q96PC3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP1S3Q96PC3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
AP1S3Q96PC3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
AP1S3Q96PC3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
AP1S3Q96PC3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
AP1S3Q96PC3 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
AP1S3Q96PC3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S3Q96PC3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S3Q96PC3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S3Q96PC3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S3Q96PC3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S3Q96PC3 AC093536.1-201ENST00000569153 554 ntBASIC16.76■□□□□ 0.27
AP1S3Q96PC3 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S3Q96PC3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC16.76■□□□□ 0.27
AP1S3Q96PC3 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
AP1S3Q96PC3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S3Q96PC3 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC16.76■□□□□ 0.27
AP1S3Q96PC3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S3Q96PC3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S3Q96PC3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC16.75■□□□□ 0.27
AP1S3Q96PC3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S3Q96PC3 LINC00565-201ENST00000562710 2331 ntBASIC16.75■□□□□ 0.27
AP1S3Q96PC3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S3Q96PC3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC16.75■□□□□ 0.27
AP1S3Q96PC3 ECEL1P2-201ENST00000461596 1295 ntBASIC16.75■□□□□ 0.27
AP1S3Q96PC3 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC16.75■□□□□ 0.27
AP1S3Q96PC3 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC16.75■□□□□ 0.27
AP1S3Q96PC3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S3Q96PC3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S3Q96PC3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
AP1S3Q96PC3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC16.75■□□□□ 0.27
AP1S3Q96PC3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC16.75■□□□□ 0.27
AP1S3Q96PC3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
AP1S3Q96PC3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
AP1S3Q96PC3 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
AP1S3Q96PC3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S3Q96PC3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S3Q96PC3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S3Q96PC3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S3Q96PC3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S3Q96PC3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S3Q96PC3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
AP1S3Q96PC3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S3Q96PC3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S3Q96PC3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S3Q96PC3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S3Q96PC3 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC16.74■□□□□ 0.27
AP1S3Q96PC3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
AP1S3Q96PC3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.74■□□□□ 0.27
AP1S3Q96PC3 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S3Q96PC3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S3Q96PC3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
AP1S3Q96PC3 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S3Q96PC3 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S3Q96PC3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S3Q96PC3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S3Q96PC3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC16.73■□□□□ 0.27
AP1S3Q96PC3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S3Q96PC3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S3Q96PC3 ABHD17AP4-201ENST00000411545 909 ntBASIC16.73■□□□□ 0.27
AP1S3Q96PC3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
AP1S3Q96PC3 C1orf229-201ENST00000623686 2258 ntBASIC16.73■□□□□ 0.27
AP1S3Q96PC3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S3Q96PC3 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S3Q96PC3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S3Q96PC3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
AP1S3Q96PC3 RNF165-205ENST00000588679 2904 ntBASIC16.73■□□□□ 0.27
AP1S3Q96PC3 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP1S3Q96PC3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
AP1S3Q96PC3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC16.72■□□□□ 0.27
AP1S3Q96PC3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
AP1S3Q96PC3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
AP1S3Q96PC3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
AP1S3Q96PC3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP1S3Q96PC3 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP1S3Q96PC3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP1S3Q96PC3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP1S3Q96PC3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
AP1S3Q96PC3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC16.72■□□□□ 0.27
AP1S3Q96PC3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC16.72■□□□□ 0.27
AP1S3Q96PC3 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP1S3Q96PC3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP1S3Q96PC3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
AP1S3Q96PC3 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP1S3Q96PC3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
AP1S3Q96PC3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP1S3Q96PC3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP1S3Q96PC3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
AP1S3Q96PC3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AP1S3Q96PC3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP1S3Q96PC3 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP1S3Q96PC3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC16.71■□□□□ 0.27
AP1S3Q96PC3 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms