Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.55■□□□□ 0.4
NPIPB3Q92617 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC17.55■□□□□ 0.4
NPIPB3Q92617 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC17.55■□□□□ 0.4
NPIPB3Q92617 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.55■□□□□ 0.4
NPIPB3Q92617 ESRRAP2-201ENST00000418437 1549 ntBASIC17.55■□□□□ 0.4
NPIPB3Q92617 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.55■□□□□ 0.4
NPIPB3Q92617 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPB3Q92617 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
NPIPB3Q92617 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPB3Q92617 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.54■□□□□ 0.4
NPIPB3Q92617 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.54■□□□□ 0.4
NPIPB3Q92617 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPB3Q92617 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPB3Q92617 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
NPIPB3Q92617 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPB3Q92617 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPB3Q92617 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPB3Q92617 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPB3Q92617 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPB3Q92617 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPB3Q92617 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPB3Q92617 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NPIPB3Q92617 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
NPIPB3Q92617 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.53■□□□□ 0.4
NPIPB3Q92617 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPB3Q92617 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.53■□□□□ 0.4
NPIPB3Q92617 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC17.53■□□□□ 0.4
NPIPB3Q92617 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC17.53■□□□□ 0.4
NPIPB3Q92617 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC17.53■□□□□ 0.4
NPIPB3Q92617 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.53■□□□□ 0.4
NPIPB3Q92617 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPB3Q92617 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NPIPB3Q92617 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPB3Q92617 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPB3Q92617 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPB3Q92617 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPB3Q92617 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
NPIPB3Q92617 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NPIPB3Q92617 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
NPIPB3Q92617 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NPIPB3Q92617 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NPIPB3Q92617 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NPIPB3Q92617 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
NPIPB3Q92617 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.52■□□□□ 0.4
NPIPB3Q92617 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17.52■□□□□ 0.4
NPIPB3Q92617 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
NPIPB3Q92617 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NPIPB3Q92617 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NPIPB3Q92617 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NPIPB3Q92617 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NPIPB3Q92617 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NPIPB3Q92617 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NPIPB3Q92617 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.52■□□□□ 0.39
NPIPB3Q92617 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.52■□□□□ 0.39
NPIPB3Q92617 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.52■□□□□ 0.39
NPIPB3Q92617 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.51■□□□□ 0.39
NPIPB3Q92617 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.51■□□□□ 0.39
NPIPB3Q92617 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPIPB3Q92617 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NPIPB3Q92617 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.51■□□□□ 0.39
NPIPB3Q92617 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPIPB3Q92617 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPIPB3Q92617 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
NPIPB3Q92617 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NPIPB3Q92617 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NPIPB3Q92617 AC242852.2-201ENST00000615738 1807 ntBASIC17.51■□□□□ 0.39
NPIPB3Q92617 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPIPB3Q92617 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
NPIPB3Q92617 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPIPB3Q92617 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPIPB3Q92617 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPIPB3Q92617 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPIPB3Q92617 AC127496.7-201ENST00000625110 1798 ntBASIC17.51■□□□□ 0.39
NPIPB3Q92617 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPB3Q92617 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPB3Q92617 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPB3Q92617 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPB3Q92617 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
NPIPB3Q92617 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPB3Q92617 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPB3Q92617 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPB3Q92617 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPB3Q92617 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.5■□□□□ 0.39
NPIPB3Q92617 MIR4508-201ENST00000584178 70 ntBASIC17.5■□□□□ 0.39
NPIPB3Q92617 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC17.5■□□□□ 0.39
NPIPB3Q92617 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPB3Q92617 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPB3Q92617 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
NPIPB3Q92617 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPB3Q92617 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPB3Q92617 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
NPIPB3Q92617 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPB3Q92617 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
NPIPB3Q92617 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPB3Q92617 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPB3Q92617 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.5■□□□□ 0.39
NPIPB3Q92617 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPB3Q92617 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
NPIPB3Q92617 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPB3Q92617 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms