Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
RNF139Q8WU17 PBX2P1-201ENST00000493219 1291 ntBASIC23.41■■□□□ 1.34
RNF139Q8WU17 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RNF139Q8WU17 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.41■■□□□ 1.34
RNF139Q8WU17 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
RNF139Q8WU17 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RNF139Q8WU17 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
RNF139Q8WU17 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
RNF139Q8WU17 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF139Q8WU17 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF139Q8WU17 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF139Q8WU17 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF139Q8WU17 AC006455.2-201ENST00000429931 906 ntBASIC23.4■■□□□ 1.34
RNF139Q8WU17 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF139Q8WU17 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RNF139Q8WU17 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.4■■□□□ 1.34
RNF139Q8WU17 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF139Q8WU17 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RNF139Q8WU17 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.4■■□□□ 1.34
RNF139Q8WU17 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF139Q8WU17 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
RNF139Q8WU17 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.4■■□□□ 1.34
RNF139Q8WU17 ANOS2P-203ENST00000472227 1816 ntBASIC23.4■■□□□ 1.34
RNF139Q8WU17 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.39■■□□□ 1.34
RNF139Q8WU17 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.39■■□□□ 1.33
RNF139Q8WU17 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.39■■□□□ 1.33
RNF139Q8WU17 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.39■■□□□ 1.33
RNF139Q8WU17 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
RNF139Q8WU17 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
RNF139Q8WU17 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
RNF139Q8WU17 AC135279.3-201ENST00000610945 1311 ntBASIC23.38■■□□□ 1.33
RNF139Q8WU17 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.38■■□□□ 1.33
RNF139Q8WU17 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RNF139Q8WU17 SERBP1P1-201ENST00000396021 1160 ntBASIC23.38■■□□□ 1.33
RNF139Q8WU17 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.38■■□□□ 1.33
RNF139Q8WU17 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.38■■□□□ 1.33
RNF139Q8WU17 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.38■■□□□ 1.33
RNF139Q8WU17 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RNF139Q8WU17 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.37■■□□□ 1.33
RNF139Q8WU17 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.37■■□□□ 1.33
RNF139Q8WU17 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
RNF139Q8WU17 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.37■■□□□ 1.33
RNF139Q8WU17 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RNF139Q8WU17 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.37■■□□□ 1.33
RNF139Q8WU17 LINC01529-204ENST00000636474 1715 ntBASIC23.37■■□□□ 1.33
RNF139Q8WU17 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.37■■□□□ 1.33
RNF139Q8WU17 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.37■■□□□ 1.33
RNF139Q8WU17 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RNF139Q8WU17 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.36■■□□□ 1.33
RNF139Q8WU17 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
RNF139Q8WU17 AC079630.1-202ENST00000618127 1840 ntBASIC23.36■■□□□ 1.33
RNF139Q8WU17 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RNF139Q8WU17 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RNF139Q8WU17 AC024257.2-201ENST00000549699 147 ntBASIC23.36■■□□□ 1.33
RNF139Q8WU17 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.36■■□□□ 1.33
RNF139Q8WU17 AL138724.1-201ENST00000606771 1088 ntBASIC23.36■■□□□ 1.33
RNF139Q8WU17 AC106739.1-201ENST00000617035 715 ntBASIC23.36■■□□□ 1.33
RNF139Q8WU17 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
RNF139Q8WU17 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.36■■□□□ 1.33
RNF139Q8WU17 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
RNF139Q8WU17 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RNF139Q8WU17 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RNF139Q8WU17 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.35■■□□□ 1.33
RNF139Q8WU17 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RNF139Q8WU17 pRNA.6-201ENST00000610482 90 ntBASIC23.35■■□□□ 1.33
RNF139Q8WU17 pRNA.5-201ENST00000612139 90 ntBASIC23.35■■□□□ 1.33
RNF139Q8WU17 pRNA.11-201ENST00000618423 90 ntBASIC23.35■■□□□ 1.33
RNF139Q8WU17 pRNA.13-201ENST00000619112 90 ntBASIC23.35■■□□□ 1.33
RNF139Q8WU17 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.35■■□□□ 1.33
RNF139Q8WU17 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.35■■□□□ 1.33
RNF139Q8WU17 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
RNF139Q8WU17 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RNF139Q8WU17 AC092068.2-201ENST00000590491 1708 ntBASIC23.34■■□□□ 1.33
RNF139Q8WU17 DUSP8P5-201ENST00000422884 1815 ntBASIC23.34■■□□□ 1.33
RNF139Q8WU17 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.34■■□□□ 1.33
RNF139Q8WU17 DUX4L4-201ENST00000566884 1269 ntBASIC23.34■■□□□ 1.33
RNF139Q8WU17 MIR3181-201ENST00000578512 73 ntBASIC23.34■■□□□ 1.33
RNF139Q8WU17 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
RNF139Q8WU17 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
RNF139Q8WU17 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
RNF139Q8WU17 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RNF139Q8WU17 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RNF139Q8WU17 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RNF139Q8WU17 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
RNF139Q8WU17 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RNF139Q8WU17 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
RNF139Q8WU17 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RNF139Q8WU17 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RNF139Q8WU17 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.33■■□□□ 1.33
RNF139Q8WU17 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.33■■□□□ 1.33
RNF139Q8WU17 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RNF139Q8WU17 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RNF139Q8WU17 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RNF139Q8WU17 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.33■■□□□ 1.33
RNF139Q8WU17 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.33■■□□□ 1.33
RNF139Q8WU17 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RNF139Q8WU17 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
RNF139Q8WU17 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.32■■□□□ 1.32
RNF139Q8WU17 MIR638-201ENST00000385237 100 ntBASIC23.32■■□□□ 1.32
RNF139Q8WU17 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms