Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC26.2■■□□□ 1.78
SMARCC2Q8TAQ2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SMARCC2Q8TAQ2 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SMARCC2Q8TAQ2 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
SMARCC2Q8TAQ2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SMARCC2Q8TAQ2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
SMARCC2Q8TAQ2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC26.19■■□□□ 1.78
SMARCC2Q8TAQ2 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC26.19■■□□□ 1.78
SMARCC2Q8TAQ2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC26.19■■□□□ 1.78
SMARCC2Q8TAQ2 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SMARCC2Q8TAQ2 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SMARCC2Q8TAQ2 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SMARCC2Q8TAQ2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SMARCC2Q8TAQ2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SMARCC2Q8TAQ2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SMARCC2Q8TAQ2 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SMARCC2Q8TAQ2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SMARCC2Q8TAQ2 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
SMARCC2Q8TAQ2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SMARCC2Q8TAQ2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SMARCC2Q8TAQ2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC26.18■■□□□ 1.78
SMARCC2Q8TAQ2 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SMARCC2Q8TAQ2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC26.18■■□□□ 1.78
SMARCC2Q8TAQ2 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SMARCC2Q8TAQ2 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
SMARCC2Q8TAQ2 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC26.17■■□□□ 1.78
SMARCC2Q8TAQ2 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC26.17■■□□□ 1.78
SMARCC2Q8TAQ2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SMARCC2Q8TAQ2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SMARCC2Q8TAQ2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC26.17■■□□□ 1.78
SMARCC2Q8TAQ2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC26.17■■□□□ 1.78
SMARCC2Q8TAQ2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC26.17■■□□□ 1.78
SMARCC2Q8TAQ2 C1orf229-201ENST00000623686 2258 ntBASIC26.17■■□□□ 1.78
SMARCC2Q8TAQ2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SMARCC2Q8TAQ2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SMARCC2Q8TAQ2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC26.16■■□□□ 1.78
SMARCC2Q8TAQ2 AL136116.3-201ENST00000402907 1138 ntBASIC26.16■■□□□ 1.78
SMARCC2Q8TAQ2 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SMARCC2Q8TAQ2 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SMARCC2Q8TAQ2 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
SMARCC2Q8TAQ2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC26.16■■□□□ 1.78
SMARCC2Q8TAQ2 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC26.16■■□□□ 1.78
SMARCC2Q8TAQ2 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SMARCC2Q8TAQ2 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SMARCC2Q8TAQ2 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SMARCC2Q8TAQ2 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
SMARCC2Q8TAQ2 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC26.15■■□□□ 1.78
SMARCC2Q8TAQ2 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
SMARCC2Q8TAQ2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SMARCC2Q8TAQ2 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
SMARCC2Q8TAQ2 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SMARCC2Q8TAQ2 AL512631.2-201ENST00000604634 923 ntBASIC26.15■■□□□ 1.78
SMARCC2Q8TAQ2 MIR4466-201ENST00000606121 54 ntBASIC26.15■■□□□ 1.78
SMARCC2Q8TAQ2 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.15■■□□□ 1.78
SMARCC2Q8TAQ2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC26.15■■□□□ 1.78
SMARCC2Q8TAQ2 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SMARCC2Q8TAQ2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SMARCC2Q8TAQ2 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SMARCC2Q8TAQ2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SMARCC2Q8TAQ2 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SMARCC2Q8TAQ2 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
SMARCC2Q8TAQ2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.77
SMARCC2Q8TAQ2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC26.14■■□□□ 1.77
SMARCC2Q8TAQ2 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC26.14■■□□□ 1.77
SMARCC2Q8TAQ2 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
SMARCC2Q8TAQ2 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
SMARCC2Q8TAQ2 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC26.13■■□□□ 1.77
SMARCC2Q8TAQ2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SMARCC2Q8TAQ2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC26.13■■□□□ 1.77
SMARCC2Q8TAQ2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SMARCC2Q8TAQ2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SMARCC2Q8TAQ2 AL353803.4-201ENST00000565882 1934 ntBASIC26.13■■□□□ 1.77
SMARCC2Q8TAQ2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
SMARCC2Q8TAQ2 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SMARCC2Q8TAQ2 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
SMARCC2Q8TAQ2 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
SMARCC2Q8TAQ2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
SMARCC2Q8TAQ2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
SMARCC2Q8TAQ2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
SMARCC2Q8TAQ2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
SMARCC2Q8TAQ2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SMARCC2Q8TAQ2 MTURN-203ENST00000409688 843 ntTSL 2 BASIC26.12■■□□□ 1.77
SMARCC2Q8TAQ2 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SMARCC2Q8TAQ2 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SMARCC2Q8TAQ2 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC26.11■■□□□ 1.77
SMARCC2Q8TAQ2 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC26.11■■□□□ 1.77
SMARCC2Q8TAQ2 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SMARCC2Q8TAQ2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SMARCC2Q8TAQ2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC26.11■■□□□ 1.77
SMARCC2Q8TAQ2 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SMARCC2Q8TAQ2 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SMARCC2Q8TAQ2 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SMARCC2Q8TAQ2 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC26.1■■□□□ 1.77
SMARCC2Q8TAQ2 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC26.1■■□□□ 1.77
SMARCC2Q8TAQ2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SMARCC2Q8TAQ2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
SMARCC2Q8TAQ2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC26.1■■□□□ 1.77
SMARCC2Q8TAQ2 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SMARCC2Q8TAQ2 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SMARCC2Q8TAQ2 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms