Protein–RNA interactions for Protein: Q8NEP9

ZNF555, Zinc finger protein 555, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF555Q8NEP9 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.66■□□□□ 0.9
ZNF555Q8NEP9 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF555Q8NEP9 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF555Q8NEP9 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
ZNF555Q8NEP9 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
ZNF555Q8NEP9 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.66■□□□□ 0.9
ZNF555Q8NEP9 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF555Q8NEP9 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.66■□□□□ 0.9
ZNF555Q8NEP9 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ZNF555Q8NEP9 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF555Q8NEP9 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF555Q8NEP9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF555Q8NEP9 AC139530.1-201ENST00000575312 1977 ntBASIC20.65■□□□□ 0.9
ZNF555Q8NEP9 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF555Q8NEP9 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
ZNF555Q8NEP9 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.65■□□□□ 0.9
ZNF555Q8NEP9 ECEL1P2-201ENST00000461596 1295 ntBASIC20.65■□□□□ 0.9
ZNF555Q8NEP9 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
ZNF555Q8NEP9 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF555Q8NEP9 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF555Q8NEP9 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.65■□□□□ 0.9
ZNF555Q8NEP9 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.65■□□□□ 0.9
ZNF555Q8NEP9 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF555Q8NEP9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.65■□□□□ 0.9
ZNF555Q8NEP9 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF555Q8NEP9 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
ZNF555Q8NEP9 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZNF555Q8NEP9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZNF555Q8NEP9 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
ZNF555Q8NEP9 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZNF555Q8NEP9 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF555Q8NEP9 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.64■□□□□ 0.89
ZNF555Q8NEP9 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF555Q8NEP9 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF555Q8NEP9 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.64■□□□□ 0.89
ZNF555Q8NEP9 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF555Q8NEP9 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.64■□□□□ 0.89
ZNF555Q8NEP9 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF555Q8NEP9 FBXW4P1-201ENST00000426721 2239 ntBASIC20.63■□□□□ 0.89
ZNF555Q8NEP9 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF555Q8NEP9 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF555Q8NEP9 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF555Q8NEP9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.63■□□□□ 0.89
ZNF555Q8NEP9 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
ZNF555Q8NEP9 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF555Q8NEP9 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
ZNF555Q8NEP9 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.63■□□□□ 0.89
ZNF555Q8NEP9 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.63■□□□□ 0.89
ZNF555Q8NEP9 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF555Q8NEP9 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.63■□□□□ 0.89
ZNF555Q8NEP9 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
ZNF555Q8NEP9 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ZNF555Q8NEP9 SLC25A24-204ENST00000569674 2357 ntBASIC20.63■□□□□ 0.89
ZNF555Q8NEP9 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF555Q8NEP9 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.62■□□□□ 0.89
ZNF555Q8NEP9 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF555Q8NEP9 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
ZNF555Q8NEP9 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.62■□□□□ 0.89
ZNF555Q8NEP9 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF555Q8NEP9 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
ZNF555Q8NEP9 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF555Q8NEP9 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.62■□□□□ 0.89
ZNF555Q8NEP9 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF555Q8NEP9 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF555Q8NEP9 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF555Q8NEP9 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF555Q8NEP9 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF555Q8NEP9 ALDH1A3-203ENST00000557963 1670 ntBASIC20.61■□□□□ 0.89
ZNF555Q8NEP9 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF555Q8NEP9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF555Q8NEP9 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF555Q8NEP9 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.61■□□□□ 0.89
ZNF555Q8NEP9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF555Q8NEP9 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
ZNF555Q8NEP9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF555Q8NEP9 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF555Q8NEP9 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF555Q8NEP9 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
ZNF555Q8NEP9 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF555Q8NEP9 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.6■□□□□ 0.89
ZNF555Q8NEP9 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ZNF555Q8NEP9 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.6■□□□□ 0.89
ZNF555Q8NEP9 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF555Q8NEP9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF555Q8NEP9 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF555Q8NEP9 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF555Q8NEP9 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF555Q8NEP9 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF555Q8NEP9 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF555Q8NEP9 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
ZNF555Q8NEP9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF555Q8NEP9 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF555Q8NEP9 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF555Q8NEP9 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF555Q8NEP9 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF555Q8NEP9 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF555Q8NEP9 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF555Q8NEP9 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.59■□□□□ 0.89
ZNF555Q8NEP9 MIR3648-2-201ENST00000581792 180 ntBASIC20.59■□□□□ 0.89
ZNF555Q8NEP9 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms