Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.25■□□□□ 0.99
SRFBP1Q8NEF9 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
SRFBP1Q8NEF9 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.25■□□□□ 0.99
SRFBP1Q8NEF9 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.25■□□□□ 0.99
SRFBP1Q8NEF9 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
SRFBP1Q8NEF9 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SRFBP1Q8NEF9 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.25■□□□□ 0.99
SRFBP1Q8NEF9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.25■□□□□ 0.99
SRFBP1Q8NEF9 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SRFBP1Q8NEF9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SRFBP1Q8NEF9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SRFBP1Q8NEF9 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SRFBP1Q8NEF9 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.25■□□□□ 0.99
SRFBP1Q8NEF9 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SRFBP1Q8NEF9 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SRFBP1Q8NEF9 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SRFBP1Q8NEF9 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
SRFBP1Q8NEF9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.25■□□□□ 0.99
SRFBP1Q8NEF9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.24■□□□□ 0.99
SRFBP1Q8NEF9 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SRFBP1Q8NEF9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.24■□□□□ 0.99
SRFBP1Q8NEF9 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
SRFBP1Q8NEF9 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.24■□□□□ 0.99
SRFBP1Q8NEF9 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SRFBP1Q8NEF9 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.23■□□□□ 0.99
SRFBP1Q8NEF9 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.23■□□□□ 0.99
SRFBP1Q8NEF9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.23■□□□□ 0.99
SRFBP1Q8NEF9 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.23■□□□□ 0.99
SRFBP1Q8NEF9 AC092171.4-201ENST00000609130 632 ntBASIC21.23■□□□□ 0.99
SRFBP1Q8NEF9 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.23■□□□□ 0.99
SRFBP1Q8NEF9 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SRFBP1Q8NEF9 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SRFBP1Q8NEF9 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
SRFBP1Q8NEF9 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
SRFBP1Q8NEF9 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.23■□□□□ 0.99
SRFBP1Q8NEF9 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
SRFBP1Q8NEF9 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SRFBP1Q8NEF9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.23■□□□□ 0.99
SRFBP1Q8NEF9 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.22■□□□□ 0.99
SRFBP1Q8NEF9 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SRFBP1Q8NEF9 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SRFBP1Q8NEF9 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.22■□□□□ 0.99
SRFBP1Q8NEF9 SRD5A1P1-201ENST00000442297 786 ntBASIC21.22■□□□□ 0.99
SRFBP1Q8NEF9 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.22■□□□□ 0.99
SRFBP1Q8NEF9 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SRFBP1Q8NEF9 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.22■□□□□ 0.99
SRFBP1Q8NEF9 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.22■□□□□ 0.99
SRFBP1Q8NEF9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SRFBP1Q8NEF9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.22■□□□□ 0.99
SRFBP1Q8NEF9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.22■□□□□ 0.99
SRFBP1Q8NEF9 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SRFBP1Q8NEF9 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SRFBP1Q8NEF9 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
SRFBP1Q8NEF9 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SRFBP1Q8NEF9 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SRFBP1Q8NEF9 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
SRFBP1Q8NEF9 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.21■□□□□ 0.99
SRFBP1Q8NEF9 AC009086.3-201ENST00000623486 1008 ntBASIC21.21■□□□□ 0.99
SRFBP1Q8NEF9 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SRFBP1Q8NEF9 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SRFBP1Q8NEF9 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.2■□□□□ 0.99
SRFBP1Q8NEF9 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SRFBP1Q8NEF9 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SRFBP1Q8NEF9 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.2■□□□□ 0.98
SRFBP1Q8NEF9 AL512631.2-201ENST00000604634 923 ntBASIC21.2■□□□□ 0.98
SRFBP1Q8NEF9 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.19■□□□□ 0.98
SRFBP1Q8NEF9 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.19■□□□□ 0.98
SRFBP1Q8NEF9 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRFBP1Q8NEF9 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRFBP1Q8NEF9 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRFBP1Q8NEF9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRFBP1Q8NEF9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.19■□□□□ 0.98
SRFBP1Q8NEF9 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRFBP1Q8NEF9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SRFBP1Q8NEF9 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRFBP1Q8NEF9 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.19■□□□□ 0.98
SRFBP1Q8NEF9 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.19■□□□□ 0.98
SRFBP1Q8NEF9 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRFBP1Q8NEF9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRFBP1Q8NEF9 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRFBP1Q8NEF9 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRFBP1Q8NEF9 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SRFBP1Q8NEF9 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SRFBP1Q8NEF9 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SRFBP1Q8NEF9 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SRFBP1Q8NEF9 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.18■□□□□ 0.98
SRFBP1Q8NEF9 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.18■□□□□ 0.98
SRFBP1Q8NEF9 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.18■□□□□ 0.98
SRFBP1Q8NEF9 AC131212.1-201ENST00000613771 668 ntBASIC21.18■□□□□ 0.98
SRFBP1Q8NEF9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.18■□□□□ 0.98
SRFBP1Q8NEF9 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.18■□□□□ 0.98
SRFBP1Q8NEF9 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SRFBP1Q8NEF9 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SRFBP1Q8NEF9 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SRFBP1Q8NEF9 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SRFBP1Q8NEF9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.18■□□□□ 0.98
SRFBP1Q8NEF9 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.18■□□□□ 0.98
SRFBP1Q8NEF9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRFBP1Q8NEF9 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SRFBP1Q8NEF9 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms