Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 SYT6-210ENST00000641643 1587 ntBASIC23.75■■□□□ 1.39
TTC39CQ8N584 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TTC39CQ8N584 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TTC39CQ8N584 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TTC39CQ8N584 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.75■■□□□ 1.39
TTC39CQ8N584 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
TTC39CQ8N584 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
TTC39CQ8N584 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
TTC39CQ8N584 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
TTC39CQ8N584 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
TTC39CQ8N584 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
TTC39CQ8N584 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TTC39CQ8N584 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.74■■□□□ 1.39
TTC39CQ8N584 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.74■■□□□ 1.39
TTC39CQ8N584 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.74■■□□□ 1.39
TTC39CQ8N584 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.74■■□□□ 1.39
TTC39CQ8N584 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.74■■□□□ 1.39
TTC39CQ8N584 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
TTC39CQ8N584 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TTC39CQ8N584 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.74■■□□□ 1.39
TTC39CQ8N584 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
TTC39CQ8N584 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.74■■□□□ 1.39
TTC39CQ8N584 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TTC39CQ8N584 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TTC39CQ8N584 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.73■■□□□ 1.39
TTC39CQ8N584 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
TTC39CQ8N584 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TTC39CQ8N584 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.73■■□□□ 1.39
TTC39CQ8N584 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TTC39CQ8N584 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
TTC39CQ8N584 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.73■■□□□ 1.39
TTC39CQ8N584 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TTC39CQ8N584 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.73■■□□□ 1.39
TTC39CQ8N584 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
TTC39CQ8N584 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
TTC39CQ8N584 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.73■■□□□ 1.39
TTC39CQ8N584 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.72■■□□□ 1.39
TTC39CQ8N584 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TTC39CQ8N584 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TTC39CQ8N584 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TTC39CQ8N584 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TTC39CQ8N584 AC006455.2-201ENST00000429931 906 ntBASIC23.72■■□□□ 1.39
TTC39CQ8N584 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.72■■□□□ 1.39
TTC39CQ8N584 MIR3181-201ENST00000578512 73 ntBASIC23.72■■□□□ 1.39
TTC39CQ8N584 pRNA.6-201ENST00000610482 90 ntBASIC23.72■■□□□ 1.39
TTC39CQ8N584 pRNA.5-201ENST00000612139 90 ntBASIC23.72■■□□□ 1.39
TTC39CQ8N584 pRNA.11-201ENST00000618423 90 ntBASIC23.72■■□□□ 1.39
TTC39CQ8N584 pRNA.13-201ENST00000619112 90 ntBASIC23.72■■□□□ 1.39
TTC39CQ8N584 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.72■■□□□ 1.39
TTC39CQ8N584 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.72■■□□□ 1.39
TTC39CQ8N584 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.72■■□□□ 1.39
TTC39CQ8N584 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TTC39CQ8N584 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
TTC39CQ8N584 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TTC39CQ8N584 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TTC39CQ8N584 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TTC39CQ8N584 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.71■■□□□ 1.39
TTC39CQ8N584 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TTC39CQ8N584 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.71■■□□□ 1.39
TTC39CQ8N584 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.71■■□□□ 1.39
TTC39CQ8N584 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
TTC39CQ8N584 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TTC39CQ8N584 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.71■■□□□ 1.39
TTC39CQ8N584 AC011298.3-201ENST00000615796 283 ntBASIC23.71■■□□□ 1.39
TTC39CQ8N584 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
TTC39CQ8N584 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TTC39CQ8N584 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.7■■□□□ 1.39
TTC39CQ8N584 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TTC39CQ8N584 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.7■■□□□ 1.38
TTC39CQ8N584 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.7■■□□□ 1.38
TTC39CQ8N584 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TTC39CQ8N584 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TTC39CQ8N584 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
TTC39CQ8N584 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TTC39CQ8N584 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TTC39CQ8N584 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TTC39CQ8N584 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
TTC39CQ8N584 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TTC39CQ8N584 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
TTC39CQ8N584 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
TTC39CQ8N584 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TTC39CQ8N584 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.69■■□□□ 1.38
TTC39CQ8N584 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.69■■□□□ 1.38
TTC39CQ8N584 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.69■■□□□ 1.38
TTC39CQ8N584 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.69■■□□□ 1.38
TTC39CQ8N584 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.69■■□□□ 1.38
TTC39CQ8N584 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
TTC39CQ8N584 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
TTC39CQ8N584 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.68■■□□□ 1.38
TTC39CQ8N584 SERBP1P1-201ENST00000396021 1160 ntBASIC23.68■■□□□ 1.38
TTC39CQ8N584 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.68■■□□□ 1.38
TTC39CQ8N584 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TTC39CQ8N584 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
TTC39CQ8N584 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
TTC39CQ8N584 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TTC39CQ8N584 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TTC39CQ8N584 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
TTC39CQ8N584 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TTC39CQ8N584 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TTC39CQ8N584 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms