Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RNF180Q86T96 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC25■■□□□ 1.59
RNF180Q86T96 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RNF180Q86T96 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC25■■□□□ 1.59
RNF180Q86T96 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC25■■□□□ 1.59
RNF180Q86T96 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RNF180Q86T96 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC25■■□□□ 1.59
RNF180Q86T96 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RNF180Q86T96 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RNF180Q86T96 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC24.99■■□□□ 1.59
RNF180Q86T96 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC24.99■■□□□ 1.59
RNF180Q86T96 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RNF180Q86T96 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC24.99■■□□□ 1.59
RNF180Q86T96 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC24.99■■□□□ 1.59
RNF180Q86T96 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC24.99■■□□□ 1.59
RNF180Q86T96 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.99■■□□□ 1.59
RNF180Q86T96 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC24.99■■□□□ 1.59
RNF180Q86T96 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RNF180Q86T96 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
RNF180Q86T96 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC24.98■■□□□ 1.59
RNF180Q86T96 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RNF180Q86T96 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC24.98■■□□□ 1.59
RNF180Q86T96 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
RNF180Q86T96 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC24.98■■□□□ 1.59
RNF180Q86T96 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC24.98■■□□□ 1.59
RNF180Q86T96 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC24.98■■□□□ 1.59
RNF180Q86T96 AC080038.1-201ENST00000611274 1154 ntBASIC24.98■■□□□ 1.59
RNF180Q86T96 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC24.98■■□□□ 1.59
RNF180Q86T96 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RNF180Q86T96 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC24.97■■□□□ 1.59
RNF180Q86T96 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RNF180Q86T96 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
RNF180Q86T96 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RNF180Q86T96 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RNF180Q86T96 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RNF180Q86T96 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC24.97■■□□□ 1.59
RNF180Q86T96 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC24.97■■□□□ 1.59
RNF180Q86T96 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RNF180Q86T96 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC24.97■■□□□ 1.59
RNF180Q86T96 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC24.97■■□□□ 1.59
RNF180Q86T96 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
RNF180Q86T96 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RNF180Q86T96 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RNF180Q86T96 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
RNF180Q86T96 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RNF180Q86T96 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
RNF180Q86T96 TK2-208ENST00000545043 1120 ntTSL 2 BASIC24.96■■□□□ 1.59
RNF180Q86T96 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.96■■□□□ 1.59
RNF180Q86T96 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
RNF180Q86T96 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
RNF180Q86T96 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RNF180Q86T96 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RNF180Q86T96 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC24.95■■□□□ 1.58
RNF180Q86T96 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
RNF180Q86T96 AC016769.1-201ENST00000409132 1010 ntBASIC24.95■■□□□ 1.58
RNF180Q86T96 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC24.95■■□□□ 1.58
RNF180Q86T96 AC006015.1-201ENST00000429970 570 ntBASIC24.95■■□□□ 1.58
RNF180Q86T96 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
RNF180Q86T96 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC24.95■■□□□ 1.58
RNF180Q86T96 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RNF180Q86T96 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RNF180Q86T96 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC24.94■■□□□ 1.58
RNF180Q86T96 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
RNF180Q86T96 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC24.94■■□□□ 1.58
RNF180Q86T96 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RNF180Q86T96 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
RNF180Q86T96 MFF-208ENST00000409616 1247 ntTSL 5 BASIC24.94■■□□□ 1.58
RNF180Q86T96 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
RNF180Q86T96 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
RNF180Q86T96 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RNF180Q86T96 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RNF180Q86T96 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
RNF180Q86T96 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.93■■□□□ 1.58
RNF180Q86T96 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.93■■□□□ 1.58
RNF180Q86T96 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
RNF180Q86T96 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RNF180Q86T96 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC24.93■■□□□ 1.58
RNF180Q86T96 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
RNF180Q86T96 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.93■■□□□ 1.58
RNF180Q86T96 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
RNF180Q86T96 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
RNF180Q86T96 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
RNF180Q86T96 TMEM202-AS1-202ENST00000565181 2325 ntBASIC24.92■■□□□ 1.58
RNF180Q86T96 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.92■■□□□ 1.58
RNF180Q86T96 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RNF180Q86T96 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RNF180Q86T96 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC24.92■■□□□ 1.58
RNF180Q86T96 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
RNF180Q86T96 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
RNF180Q86T96 AC137761.2-201ENST00000561729 223 ntBASIC24.92■■□□□ 1.58
RNF180Q86T96 AC145350.3-201ENST00000569033 163 ntBASIC24.92■■□□□ 1.58
RNF180Q86T96 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC24.92■■□□□ 1.58
RNF180Q86T96 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
RNF180Q86T96 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC24.92■■□□□ 1.58
RNF180Q86T96 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC24.92■■□□□ 1.58
RNF180Q86T96 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC24.92■■□□□ 1.58
RNF180Q86T96 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
RNF180Q86T96 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RNF180Q86T96 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RNF180Q86T96 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC24.91■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms