Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 BX664725.1-201ENST00000438252 379 ntBASIC23.12■■□□□ 1.29
FOXR1Q6PIV2 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
FOXR1Q6PIV2 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.12■■□□□ 1.29
FOXR1Q6PIV2 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.12■■□□□ 1.29
FOXR1Q6PIV2 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
FOXR1Q6PIV2 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
FOXR1Q6PIV2 MIR4787-201ENST00000607364 84 ntBASIC23.12■■□□□ 1.29
FOXR1Q6PIV2 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
FOXR1Q6PIV2 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
FOXR1Q6PIV2 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.12■■□□□ 1.29
FOXR1Q6PIV2 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
FOXR1Q6PIV2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
FOXR1Q6PIV2 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC23.12■■□□□ 1.29
FOXR1Q6PIV2 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
FOXR1Q6PIV2 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.12■■□□□ 1.29
FOXR1Q6PIV2 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
FOXR1Q6PIV2 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
FOXR1Q6PIV2 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
FOXR1Q6PIV2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC23.11■■□□□ 1.29
FOXR1Q6PIV2 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
FOXR1Q6PIV2 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
FOXR1Q6PIV2 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
FOXR1Q6PIV2 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
FOXR1Q6PIV2 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
FOXR1Q6PIV2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
FOXR1Q6PIV2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
FOXR1Q6PIV2 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
FOXR1Q6PIV2 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
FOXR1Q6PIV2 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
FOXR1Q6PIV2 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.11■■□□□ 1.29
FOXR1Q6PIV2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
FOXR1Q6PIV2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
FOXR1Q6PIV2 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
FOXR1Q6PIV2 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
FOXR1Q6PIV2 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
FOXR1Q6PIV2 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
FOXR1Q6PIV2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
FOXR1Q6PIV2 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
FOXR1Q6PIV2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.1■■□□□ 1.29
FOXR1Q6PIV2 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
FOXR1Q6PIV2 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
FOXR1Q6PIV2 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
FOXR1Q6PIV2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
FOXR1Q6PIV2 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
FOXR1Q6PIV2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
FOXR1Q6PIV2 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
FOXR1Q6PIV2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
FOXR1Q6PIV2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
FOXR1Q6PIV2 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
FOXR1Q6PIV2 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.09■■□□□ 1.29
FOXR1Q6PIV2 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
FOXR1Q6PIV2 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
FOXR1Q6PIV2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
FOXR1Q6PIV2 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
FOXR1Q6PIV2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC23.09■■□□□ 1.29
FOXR1Q6PIV2 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.08■■□□□ 1.29
FOXR1Q6PIV2 ANOS2P-203ENST00000472227 1816 ntBASIC23.08■■□□□ 1.29
FOXR1Q6PIV2 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
FOXR1Q6PIV2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
FOXR1Q6PIV2 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
FOXR1Q6PIV2 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
FOXR1Q6PIV2 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
FOXR1Q6PIV2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.08■■□□□ 1.29
FOXR1Q6PIV2 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
FOXR1Q6PIV2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
FOXR1Q6PIV2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
FOXR1Q6PIV2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
FOXR1Q6PIV2 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.08■■□□□ 1.28
FOXR1Q6PIV2 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
FOXR1Q6PIV2 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
FOXR1Q6PIV2 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
FOXR1Q6PIV2 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
FOXR1Q6PIV2 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
FOXR1Q6PIV2 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
FOXR1Q6PIV2 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.07■■□□□ 1.28
FOXR1Q6PIV2 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.06■■□□□ 1.28
FOXR1Q6PIV2 TSPY9P-201ENST00000440215 945 ntBASIC23.06■■□□□ 1.28
FOXR1Q6PIV2 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.06■■□□□ 1.28
FOXR1Q6PIV2 TSPY11P-201ENST00000442607 1045 ntBASIC23.06■■□□□ 1.28
FOXR1Q6PIV2 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
FOXR1Q6PIV2 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
FOXR1Q6PIV2 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
FOXR1Q6PIV2 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
FOXR1Q6PIV2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
FOXR1Q6PIV2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
FOXR1Q6PIV2 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
FOXR1Q6PIV2 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
FOXR1Q6PIV2 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.05■■□□□ 1.28
FOXR1Q6PIV2 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.05■■□□□ 1.28
FOXR1Q6PIV2 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
FOXR1Q6PIV2 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
FOXR1Q6PIV2 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.05■■□□□ 1.28
FOXR1Q6PIV2 KRT16P3-201ENST00000439127 1283 ntBASIC23.05■■□□□ 1.28
FOXR1Q6PIV2 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.05■■□□□ 1.28
FOXR1Q6PIV2 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
FOXR1Q6PIV2 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC23.05■■□□□ 1.28
FOXR1Q6PIV2 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC23.05■■□□□ 1.28
FOXR1Q6PIV2 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
FOXR1Q6PIV2 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
FOXR1Q6PIV2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 220.8 ms