Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SGO1Q5FBB7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SGO1Q5FBB7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SGO1Q5FBB7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.62■■□□□ 1.05
SGO1Q5FBB7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SGO1Q5FBB7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
SGO1Q5FBB7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
SGO1Q5FBB7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SGO1Q5FBB7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
SGO1Q5FBB7 PKD1P6-201ENST00000343738 4769 ntBASIC21.61■■□□□ 1.05
SGO1Q5FBB7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
SGO1Q5FBB7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SGO1Q5FBB7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.61■■□□□ 1.05
SGO1Q5FBB7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.61■■□□□ 1.05
SGO1Q5FBB7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SGO1Q5FBB7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SGO1Q5FBB7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SGO1Q5FBB7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SGO1Q5FBB7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SGO1Q5FBB7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SGO1Q5FBB7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SGO1Q5FBB7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.61■■□□□ 1.05
SGO1Q5FBB7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SGO1Q5FBB7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
SGO1Q5FBB7 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SGO1Q5FBB7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SGO1Q5FBB7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SGO1Q5FBB7 AL353803.4-201ENST00000565882 1934 ntBASIC21.61■■□□□ 1.05
SGO1Q5FBB7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SGO1Q5FBB7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.6■■□□□ 1.05
SGO1Q5FBB7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SGO1Q5FBB7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SGO1Q5FBB7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SGO1Q5FBB7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SGO1Q5FBB7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SGO1Q5FBB7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
SGO1Q5FBB7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SGO1Q5FBB7 KRT125P-201ENST00000546827 989 ntBASIC21.6■■□□□ 1.05
SGO1Q5FBB7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.6■■□□□ 1.05
SGO1Q5FBB7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SGO1Q5FBB7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.59■■□□□ 1.05
SGO1Q5FBB7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
SGO1Q5FBB7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.59■■□□□ 1.05
SGO1Q5FBB7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SGO1Q5FBB7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SGO1Q5FBB7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.59■■□□□ 1.05
SGO1Q5FBB7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SGO1Q5FBB7 AC005703.6-201ENST00000623265 1329 ntBASIC21.58■■□□□ 1.05
SGO1Q5FBB7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SGO1Q5FBB7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SGO1Q5FBB7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.58■■□□□ 1.05
SGO1Q5FBB7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
SGO1Q5FBB7 MIR6722-201ENST00000617286 78 ntBASIC21.58■■□□□ 1.05
SGO1Q5FBB7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SGO1Q5FBB7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SGO1Q5FBB7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
SGO1Q5FBB7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SGO1Q5FBB7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SGO1Q5FBB7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
SGO1Q5FBB7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
SGO1Q5FBB7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SGO1Q5FBB7 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SGO1Q5FBB7 AC239859.2-201ENST00000444165 318 ntBASIC21.57■■□□□ 1.04
SGO1Q5FBB7 AC092028.1-203ENST00000608262 953 ntBASIC21.57■■□□□ 1.04
SGO1Q5FBB7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SGO1Q5FBB7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.57■■□□□ 1.04
SGO1Q5FBB7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SGO1Q5FBB7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.56■■□□□ 1.04
SGO1Q5FBB7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SGO1Q5FBB7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
SGO1Q5FBB7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.56■■□□□ 1.04
SGO1Q5FBB7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.56■■□□□ 1.04
SGO1Q5FBB7 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SGO1Q5FBB7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SGO1Q5FBB7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SGO1Q5FBB7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SGO1Q5FBB7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.55■■□□□ 1.04
SGO1Q5FBB7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SGO1Q5FBB7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SGO1Q5FBB7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.55■■□□□ 1.04
SGO1Q5FBB7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SGO1Q5FBB7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SGO1Q5FBB7 MIR4787-201ENST00000607364 84 ntBASIC21.55■■□□□ 1.04
SGO1Q5FBB7 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SGO1Q5FBB7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SGO1Q5FBB7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.55■■□□□ 1.04
SGO1Q5FBB7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SGO1Q5FBB7 AL117328.2-201ENST00000624617 1940 ntBASIC21.55■■□□□ 1.04
SGO1Q5FBB7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SGO1Q5FBB7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SGO1Q5FBB7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SGO1Q5FBB7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
SGO1Q5FBB7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
SGO1Q5FBB7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.54■■□□□ 1.04
SGO1Q5FBB7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.54■■□□□ 1.04
SGO1Q5FBB7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SGO1Q5FBB7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
SGO1Q5FBB7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
SGO1Q5FBB7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SGO1Q5FBB7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms