Protein–RNA interactions for Protein: P61006

RAB8A, Ras-related protein Rab-8A, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB8AP61006 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
RAB8AP61006 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.29■■□□□ 1
RAB8AP61006 AL136116.3-201ENST00000402907 1138 ntBASIC21.29■■□□□ 1
RAB8AP61006 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RAB8AP61006 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.29■■□□□ 1
RAB8AP61006 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.29■■□□□ 1
RAB8AP61006 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAB8AP61006 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAB8AP61006 AL353803.4-201ENST00000565882 1934 ntBASIC21.29■■□□□ 1
RAB8AP61006 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAB8AP61006 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
RAB8AP61006 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RAB8AP61006 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RAB8AP61006 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.28■■□□□ 1
RAB8AP61006 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.28■■□□□ 1
RAB8AP61006 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.28■■□□□ 1
RAB8AP61006 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
RAB8AP61006 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
RAB8AP61006 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.28■■□□□ 1
RAB8AP61006 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.28■■□□□ 1
RAB8AP61006 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
RAB8AP61006 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAB8AP61006 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAB8AP61006 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.27■■□□□ 1
RAB8AP61006 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.27■■□□□ 1
RAB8AP61006 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAB8AP61006 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.27■■□□□ 1
RAB8AP61006 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.27■■□□□ 1
RAB8AP61006 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
RAB8AP61006 DUSP8P5-201ENST00000422884 1815 ntBASIC21.27■□□□□ 0.99
RAB8AP61006 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RAB8AP61006 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RAB8AP61006 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAB8AP61006 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RAB8AP61006 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAB8AP61006 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RAB8AP61006 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.26■□□□□ 0.99
RAB8AP61006 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
RAB8AP61006 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RAB8AP61006 AC099791.2-201ENST00000605725 427 ntBASIC21.26■□□□□ 0.99
RAB8AP61006 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.26■□□□□ 0.99
RAB8AP61006 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAB8AP61006 LINC01529-204ENST00000636474 1715 ntBASIC21.26■□□□□ 0.99
RAB8AP61006 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB8AP61006 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RAB8AP61006 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB8AP61006 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RAB8AP61006 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RAB8AP61006 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.25■□□□□ 0.99
RAB8AP61006 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB8AP61006 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
RAB8AP61006 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB8AP61006 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
RAB8AP61006 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB8AP61006 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
RAB8AP61006 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB8AP61006 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RAB8AP61006 FP325331.1-202ENST00000623531 1380 ntBASIC21.24■□□□□ 0.99
RAB8AP61006 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAB8AP61006 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAB8AP61006 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAB8AP61006 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.24■□□□□ 0.99
RAB8AP61006 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.23■□□□□ 0.99
RAB8AP61006 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RAB8AP61006 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAB8AP61006 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.23■□□□□ 0.99
RAB8AP61006 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAB8AP61006 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RAB8AP61006 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
RAB8AP61006 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAB8AP61006 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RAB8AP61006 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RAB8AP61006 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
RAB8AP61006 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RAB8AP61006 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RAB8AP61006 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
RAB8AP61006 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB8AP61006 AC133561.1-201ENST00000568600 2415 ntBASIC21.22■□□□□ 0.99
RAB8AP61006 AC006455.2-201ENST00000429931 906 ntBASIC21.22■□□□□ 0.99
RAB8AP61006 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RAB8AP61006 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.22■□□□□ 0.99
RAB8AP61006 AC009086.3-201ENST00000623486 1008 ntBASIC21.22■□□□□ 0.99
RAB8AP61006 AC241377.3-202ENST00000626088 1088 ntBASIC21.22■□□□□ 0.99
RAB8AP61006 AC241585.3-202ENST00000628937 1088 ntBASIC21.22■□□□□ 0.99
RAB8AP61006 AC245100.8-202ENST00000629247 1058 ntBASIC21.22■□□□□ 0.99
RAB8AP61006 DUSP8P3-201ENST00000399571 1760 ntBASIC21.22■□□□□ 0.99
RAB8AP61006 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RAB8AP61006 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.22■□□□□ 0.99
RAB8AP61006 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RAB8AP61006 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.21■□□□□ 0.99
RAB8AP61006 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB8AP61006 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
RAB8AP61006 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.21■□□□□ 0.99
RAB8AP61006 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
RAB8AP61006 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.21■□□□□ 0.99
RAB8AP61006 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB8AP61006 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB8AP61006 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB8AP61006 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.2■□□□□ 0.99
RAB8AP61006 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms