Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
CLTCL1P53675 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC32.42■■■□□ 2.78
CLTCL1P53675 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC32.42■■■□□ 2.78
CLTCL1P53675 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
CLTCL1P53675 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
CLTCL1P53675 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC32.41■■■□□ 2.78
CLTCL1P53675 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
CLTCL1P53675 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
CLTCL1P53675 NME4-202ENST00000382940 766 ntTSL 3 BASIC32.41■■■□□ 2.78
CLTCL1P53675 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
CLTCL1P53675 GLI3-203ENST00000437480 451 ntTSL 2 BASIC32.41■■■□□ 2.78
CLTCL1P53675 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
CLTCL1P53675 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC32.41■■■□□ 2.78
CLTCL1P53675 AC020928.2-201ENST00000588717 2197 ntBASIC32.41■■■□□ 2.78
CLTCL1P53675 AL354811.1-201ENST00000610286 706 ntBASIC32.41■■■□□ 2.78
CLTCL1P53675 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
CLTCL1P53675 NME4-211ENST00000620944 1193 ntTSL 2 BASIC32.41■■■□□ 2.78
CLTCL1P53675 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC32.41■■■□□ 2.78
CLTCL1P53675 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC32.41■■■□□ 2.78
CLTCL1P53675 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CLTCL1P53675 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC32.4■■■□□ 2.78
CLTCL1P53675 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC32.4■■■□□ 2.78
CLTCL1P53675 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC32.4■■■□□ 2.78
CLTCL1P53675 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC32.4■■■□□ 2.78
CLTCL1P53675 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC32.4■■■□□ 2.78
CLTCL1P53675 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC32.4■■■□□ 2.78
CLTCL1P53675 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CLTCL1P53675 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC32.4■■■□□ 2.78
CLTCL1P53675 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CLTCL1P53675 FP325331.1-202ENST00000623531 1380 ntBASIC32.4■■■□□ 2.78
CLTCL1P53675 AC123595.1-201ENST00000440769 1046 ntBASIC32.4■■■□□ 2.78
CLTCL1P53675 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC32.4■■■□□ 2.78
CLTCL1P53675 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC32.4■■■□□ 2.78
CLTCL1P53675 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC32.39■■■□□ 2.78
CLTCL1P53675 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC32.39■■■□□ 2.78
CLTCL1P53675 CCDC92B-201ENST00000575506 885 ntBASIC32.39■■■□□ 2.78
CLTCL1P53675 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC32.39■■■□□ 2.78
CLTCL1P53675 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
CLTCL1P53675 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
CLTCL1P53675 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
CLTCL1P53675 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC32.38■■■□□ 2.77
CLTCL1P53675 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC32.38■■■□□ 2.77
CLTCL1P53675 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
CLTCL1P53675 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
CLTCL1P53675 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
CLTCL1P53675 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC32.38■■■□□ 2.77
CLTCL1P53675 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC32.38■■■□□ 2.77
CLTCL1P53675 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
CLTCL1P53675 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
CLTCL1P53675 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC32.37■■■□□ 2.77
CLTCL1P53675 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
CLTCL1P53675 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC32.37■■■□□ 2.77
CLTCL1P53675 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
CLTCL1P53675 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC32.37■■■□□ 2.77
CLTCL1P53675 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC32.37■■■□□ 2.77
CLTCL1P53675 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC32.37■■■□□ 2.77
CLTCL1P53675 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC32.37■■■□□ 2.77
CLTCL1P53675 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
CLTCL1P53675 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
CLTCL1P53675 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC32.37■■■□□ 2.77
CLTCL1P53675 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC32.37■■■□□ 2.77
CLTCL1P53675 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC32.37■■■□□ 2.77
CLTCL1P53675 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
CLTCL1P53675 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC32.37■■■□□ 2.77
CLTCL1P53675 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC32.36■■■□□ 2.77
CLTCL1P53675 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
CLTCL1P53675 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC32.36■■■□□ 2.77
CLTCL1P53675 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
CLTCL1P53675 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC32.36■■■□□ 2.77
CLTCL1P53675 TERF1P2-201ENST00000583350 1212 ntBASIC32.36■■■□□ 2.77
CLTCL1P53675 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC32.35■■■□□ 2.77
CLTCL1P53675 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
CLTCL1P53675 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC32.35■■■□□ 2.77
CLTCL1P53675 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC32.34■■■□□ 2.77
CLTCL1P53675 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC32.34■■■□□ 2.77
CLTCL1P53675 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC32.34■■■□□ 2.77
CLTCL1P53675 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
CLTCL1P53675 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC32.34■■■□□ 2.77
CLTCL1P53675 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC32.34■■■□□ 2.77
CLTCL1P53675 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
CLTCL1P53675 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
CLTCL1P53675 AC090192.1-201ENST00000517740 490 ntBASIC32.33■■■□□ 2.77
CLTCL1P53675 KRT18P14-201ENST00000534205 1250 ntBASIC32.33■■■□□ 2.77
CLTCL1P53675 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC32.33■■■□□ 2.77
CLTCL1P53675 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
CLTCL1P53675 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
CLTCL1P53675 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC32.33■■■□□ 2.77
CLTCL1P53675 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
CLTCL1P53675 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
CLTCL1P53675 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC32.33■■■□□ 2.77
CLTCL1P53675 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
CLTCL1P53675 AC022517.1-201ENST00000592429 346 ntBASIC32.33■■■□□ 2.77
CLTCL1P53675 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC32.32■■■□□ 2.77
CLTCL1P53675 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC32.32■■■□□ 2.76
CLTCL1P53675 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC32.32■■■□□ 2.76
CLTCL1P53675 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC32.32■■■□□ 2.76
CLTCL1P53675 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
CLTCL1P53675 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC32.32■■■□□ 2.76
CLTCL1P53675 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC32.32■■■□□ 2.76
CLTCL1P53675 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC32.31■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms