Protein–RNA interactions for Protein: P52799

EFNB2, Ephrin-B2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2P52799 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.26■□□□□ 0.67
EFNB2P52799 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.26■□□□□ 0.67
EFNB2P52799 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
EFNB2P52799 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EFNB2P52799 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
EFNB2P52799 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.26■□□□□ 0.67
EFNB2P52799 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EFNB2P52799 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.25■□□□□ 0.67
EFNB2P52799 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EFNB2P52799 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
EFNB2P52799 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EFNB2P52799 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EFNB2P52799 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EFNB2P52799 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EFNB2P52799 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
EFNB2P52799 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EFNB2P52799 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.25■□□□□ 0.67
EFNB2P52799 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
EFNB2P52799 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
EFNB2P52799 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EFNB2P52799 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EFNB2P52799 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EFNB2P52799 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFNB2P52799 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFNB2P52799 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFNB2P52799 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EFNB2P52799 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.24■□□□□ 0.67
EFNB2P52799 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.24■□□□□ 0.67
EFNB2P52799 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.24■□□□□ 0.67
EFNB2P52799 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EFNB2P52799 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.24■□□□□ 0.67
EFNB2P52799 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFNB2P52799 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFNB2P52799 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EFNB2P52799 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EFNB2P52799 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EFNB2P52799 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFNB2P52799 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFNB2P52799 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFNB2P52799 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EFNB2P52799 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFNB2P52799 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFNB2P52799 AC139530.1-201ENST00000575312 1977 ntBASIC19.23■□□□□ 0.67
EFNB2P52799 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFNB2P52799 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.23■□□□□ 0.67
EFNB2P52799 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.23■□□□□ 0.67
EFNB2P52799 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EFNB2P52799 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFNB2P52799 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.23■□□□□ 0.67
EFNB2P52799 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.23■□□□□ 0.67
EFNB2P52799 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EFNB2P52799 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.23■□□□□ 0.67
EFNB2P52799 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFNB2P52799 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFNB2P52799 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFNB2P52799 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFNB2P52799 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.22■□□□□ 0.67
EFNB2P52799 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFNB2P52799 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFNB2P52799 LONRF2P2-201ENST00000439212 571 ntBASIC19.22■□□□□ 0.67
EFNB2P52799 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.22■□□□□ 0.67
EFNB2P52799 AL451085.2-201ENST00000605085 799 ntBASIC19.22■□□□□ 0.67
EFNB2P52799 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFNB2P52799 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
EFNB2P52799 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EFNB2P52799 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFNB2P52799 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFNB2P52799 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFNB2P52799 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
EFNB2P52799 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFNB2P52799 AL024507.2-201ENST00000606070 2574 ntBASIC19.21■□□□□ 0.67
EFNB2P52799 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFNB2P52799 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFNB2P52799 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.21■□□□□ 0.67
EFNB2P52799 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFNB2P52799 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
EFNB2P52799 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EFNB2P52799 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFNB2P52799 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFNB2P52799 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFNB2P52799 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
EFNB2P52799 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EFNB2P52799 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.21■□□□□ 0.67
EFNB2P52799 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.21■□□□□ 0.67
EFNB2P52799 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFNB2P52799 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
EFNB2P52799 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.66
EFNB2P52799 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EFNB2P52799 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EFNB2P52799 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EFNB2P52799 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.2■□□□□ 0.66
EFNB2P52799 KRT8P33-201ENST00000508125 1423 ntBASIC19.2■□□□□ 0.66
EFNB2P52799 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EFNB2P52799 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
EFNB2P52799 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
EFNB2P52799 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EFNB2P52799 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EFNB2P52799 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EFNB2P52799 AL035685.1-201ENST00000636663 812 ntBASIC19.2■□□□□ 0.66
EFNB2P52799 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms