Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
EFNA3P52797 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
EFNA3P52797 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EFNA3P52797 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.95■□□□□ 0.94
EFNA3P52797 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
EFNA3P52797 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
EFNA3P52797 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
EFNA3P52797 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
EFNA3P52797 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
EFNA3P52797 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
EFNA3P52797 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
EFNA3P52797 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
EFNA3P52797 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
EFNA3P52797 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.94■□□□□ 0.94
EFNA3P52797 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.94■□□□□ 0.94
EFNA3P52797 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EFNA3P52797 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.93■□□□□ 0.94
EFNA3P52797 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
EFNA3P52797 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.93■□□□□ 0.94
EFNA3P52797 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
EFNA3P52797 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.93■□□□□ 0.94
EFNA3P52797 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.93■□□□□ 0.94
EFNA3P52797 AL499627.2-201ENST00000606283 725 ntBASIC20.93■□□□□ 0.94
EFNA3P52797 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
EFNA3P52797 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.93■□□□□ 0.94
EFNA3P52797 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.93■□□□□ 0.94
EFNA3P52797 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
EFNA3P52797 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.93■□□□□ 0.94
EFNA3P52797 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EFNA3P52797 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.93■□□□□ 0.94
EFNA3P52797 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
EFNA3P52797 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.92■□□□□ 0.94
EFNA3P52797 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
EFNA3P52797 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
EFNA3P52797 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.92■□□□□ 0.94
EFNA3P52797 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EFNA3P52797 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
EFNA3P52797 FP325331.1-202ENST00000623531 1380 ntBASIC20.92■□□□□ 0.94
EFNA3P52797 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.92■□□□□ 0.94
EFNA3P52797 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
EFNA3P52797 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EFNA3P52797 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EFNA3P52797 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EFNA3P52797 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EFNA3P52797 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
EFNA3P52797 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EFNA3P52797 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EFNA3P52797 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
EFNA3P52797 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
EFNA3P52797 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.91■□□□□ 0.94
EFNA3P52797 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.91■□□□□ 0.94
EFNA3P52797 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EFNA3P52797 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
EFNA3P52797 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
EFNA3P52797 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.91■□□□□ 0.94
EFNA3P52797 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.91■□□□□ 0.94
EFNA3P52797 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.91■□□□□ 0.94
EFNA3P52797 LINC01529-204ENST00000636474 1715 ntBASIC20.91■□□□□ 0.94
EFNA3P52797 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
EFNA3P52797 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EFNA3P52797 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.9■□□□□ 0.94
EFNA3P52797 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EFNA3P52797 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
EFNA3P52797 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
EFNA3P52797 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.9■□□□□ 0.94
EFNA3P52797 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.9■□□□□ 0.94
EFNA3P52797 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.9■□□□□ 0.94
EFNA3P52797 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.9■□□□□ 0.94
EFNA3P52797 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
EFNA3P52797 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
EFNA3P52797 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EFNA3P52797 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
EFNA3P52797 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.89■□□□□ 0.94
EFNA3P52797 AC133637.1-201ENST00000624115 1537 ntBASIC20.89■□□□□ 0.94
EFNA3P52797 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
EFNA3P52797 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
EFNA3P52797 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
EFNA3P52797 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.89■□□□□ 0.93
EFNA3P52797 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.89■□□□□ 0.93
EFNA3P52797 AC008764.7-201ENST00000593779 1081 ntBASIC20.89■□□□□ 0.93
EFNA3P52797 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
EFNA3P52797 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.89■□□□□ 0.93
EFNA3P52797 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EFNA3P52797 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.88■□□□□ 0.93
EFNA3P52797 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.88■□□□□ 0.93
EFNA3P52797 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.88■□□□□ 0.93
EFNA3P52797 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.88■□□□□ 0.93
EFNA3P52797 SLC47A1P1-202ENST00000449666 945 ntBASIC20.88■□□□□ 0.93
EFNA3P52797 AC105265.2-201ENST00000467189 838 ntBASIC20.88■□□□□ 0.93
EFNA3P52797 AC091305.1-201ENST00000479476 895 ntBASIC20.88■□□□□ 0.93
EFNA3P52797 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
EFNA3P52797 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
EFNA3P52797 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
EFNA3P52797 AL353803.4-201ENST00000565882 1934 ntBASIC20.88■□□□□ 0.93
EFNA3P52797 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EFNA3P52797 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
EFNA3P52797 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
EFNA3P52797 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.87■□□□□ 0.93
EFNA3P52797 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.87■□□□□ 0.93
EFNA3P52797 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms