Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMSP52788 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SMSP52788 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMSP52788 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SMSP52788 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SMSP52788 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SMSP52788 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMSP52788 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.78■□□□□ 0.92
SMSP52788 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.78■□□□□ 0.92
SMSP52788 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SMSP52788 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMSP52788 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.78■□□□□ 0.92
SMSP52788 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.78■□□□□ 0.92
SMSP52788 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.78■□□□□ 0.92
SMSP52788 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMSP52788 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMSP52788 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.77■□□□□ 0.92
SMSP52788 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMSP52788 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SMSP52788 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.77■□□□□ 0.92
SMSP52788 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMSP52788 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMSP52788 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMSP52788 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SMSP52788 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMSP52788 AC090877.2-201ENST00000558441 1738 ntBASIC20.77■□□□□ 0.92
SMSP52788 AC092068.2-201ENST00000590491 1708 ntBASIC20.77■□□□□ 0.92
SMSP52788 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SMSP52788 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SMSP52788 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMSP52788 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SMSP52788 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SMSP52788 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMSP52788 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.76■□□□□ 0.91
SMSP52788 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMSP52788 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMSP52788 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
SMSP52788 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMSP52788 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMSP52788 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMSP52788 AC233723.2-201ENST00000623798 2106 ntBASIC20.75■□□□□ 0.91
SMSP52788 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMSP52788 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMSP52788 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.75■□□□□ 0.91
SMSP52788 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.75■□□□□ 0.91
SMSP52788 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SMSP52788 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMSP52788 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SMSP52788 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMSP52788 DUSP8P3-201ENST00000399571 1760 ntBASIC20.74■□□□□ 0.91
SMSP52788 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
SMSP52788 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMSP52788 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.74■□□□□ 0.91
SMSP52788 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMSP52788 UNC93B3-201ENST00000308076 687 ntBASIC20.74■□□□□ 0.91
SMSP52788 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMSP52788 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.74■□□□□ 0.91
SMSP52788 SRD5A1P1-201ENST00000442297 786 ntBASIC20.74■□□□□ 0.91
SMSP52788 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.74■□□□□ 0.91
SMSP52788 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMSP52788 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMSP52788 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMSP52788 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SMSP52788 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.73■□□□□ 0.91
SMSP52788 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.73■□□□□ 0.91
SMSP52788 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMSP52788 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMSP52788 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SMSP52788 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SMSP52788 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMSP52788 RARRES2P6-201ENST00000567333 442 ntBASIC20.73■□□□□ 0.91
SMSP52788 SNX5-217ENST00000606557 1087 ntBASIC20.73■□□□□ 0.91
SMSP52788 AL136162.1-201ENST00000607711 1078 ntBASIC20.73■□□□□ 0.91
SMSP52788 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.73■□□□□ 0.91
SMSP52788 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.73■□□□□ 0.91
SMSP52788 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMSP52788 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
SMSP52788 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SMSP52788 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMSP52788 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.73■□□□□ 0.91
SMSP52788 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMSP52788 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.72■□□□□ 0.91
SMSP52788 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SMSP52788 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMSP52788 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMSP52788 ZNRF2P3-201ENST00000424200 374 ntBASIC20.72■□□□□ 0.91
SMSP52788 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMSP52788 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMSP52788 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMSP52788 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.72■□□□□ 0.91
SMSP52788 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.72■□□□□ 0.91
SMSP52788 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
SMSP52788 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMSP52788 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMSP52788 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMSP52788 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.72■□□□□ 0.91
SMSP52788 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMSP52788 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMSP52788 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.71■□□□□ 0.91
SMSP52788 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms