Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LCN1P31025 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LCN1P31025 DUX4L4-201ENST00000566884 1269 ntBASIC20.59■□□□□ 0.89
LCN1P31025 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LCN1P31025 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.59■□□□□ 0.89
LCN1P31025 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
LCN1P31025 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.58■□□□□ 0.89
LCN1P31025 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.58■□□□□ 0.89
LCN1P31025 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LCN1P31025 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.58■□□□□ 0.89
LCN1P31025 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
LCN1P31025 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LCN1P31025 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
LCN1P31025 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LCN1P31025 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
LCN1P31025 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LCN1P31025 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
LCN1P31025 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LCN1P31025 AC241377.3-202ENST00000626088 1088 ntBASIC20.58■□□□□ 0.89
LCN1P31025 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.58■□□□□ 0.89
LCN1P31025 AC241585.3-202ENST00000628937 1088 ntBASIC20.58■□□□□ 0.89
LCN1P31025 AC245100.8-202ENST00000629247 1058 ntBASIC20.58■□□□□ 0.89
LCN1P31025 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LCN1P31025 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
LCN1P31025 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LCN1P31025 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.57■□□□□ 0.88
LCN1P31025 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LCN1P31025 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
LCN1P31025 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LCN1P31025 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.57■□□□□ 0.88
LCN1P31025 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.57■□□□□ 0.88
LCN1P31025 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
LCN1P31025 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.57■□□□□ 0.88
LCN1P31025 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
LCN1P31025 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LCN1P31025 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LCN1P31025 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LCN1P31025 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.56■□□□□ 0.88
LCN1P31025 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LCN1P31025 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LCN1P31025 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LCN1P31025 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LCN1P31025 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.56■□□□□ 0.88
LCN1P31025 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LCN1P31025 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.56■□□□□ 0.88
LCN1P31025 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LCN1P31025 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.56■□□□□ 0.88
LCN1P31025 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LCN1P31025 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LCN1P31025 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
LCN1P31025 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
LCN1P31025 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.56■□□□□ 0.88
LCN1P31025 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LCN1P31025 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LCN1P31025 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
LCN1P31025 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
LCN1P31025 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LCN1P31025 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.55■□□□□ 0.88
LCN1P31025 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LCN1P31025 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LCN1P31025 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.55■□□□□ 0.88
LCN1P31025 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.55■□□□□ 0.88
LCN1P31025 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.55■□□□□ 0.88
LCN1P31025 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LCN1P31025 AL353803.4-201ENST00000565882 1934 ntBASIC20.55■□□□□ 0.88
LCN1P31025 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
LCN1P31025 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LCN1P31025 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LCN1P31025 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LCN1P31025 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
LCN1P31025 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.54■□□□□ 0.88
LCN1P31025 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LCN1P31025 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.54■□□□□ 0.88
LCN1P31025 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LCN1P31025 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LCN1P31025 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
LCN1P31025 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
LCN1P31025 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LCN1P31025 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LCN1P31025 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.53■□□□□ 0.88
LCN1P31025 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LCN1P31025 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LCN1P31025 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LCN1P31025 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.53■□□□□ 0.88
LCN1P31025 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.53■□□□□ 0.88
LCN1P31025 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.53■□□□□ 0.88
LCN1P31025 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.53■□□□□ 0.88
LCN1P31025 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LCN1P31025 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.52■□□□□ 0.88
LCN1P31025 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LCN1P31025 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.52■□□□□ 0.88
LCN1P31025 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.52■□□□□ 0.88
LCN1P31025 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.52■□□□□ 0.88
LCN1P31025 AC092171.4-201ENST00000609130 632 ntBASIC20.52■□□□□ 0.88
LCN1P31025 AC009086.3-201ENST00000623486 1008 ntBASIC20.52■□□□□ 0.88
LCN1P31025 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
LCN1P31025 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
LCN1P31025 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.52■□□□□ 0.87
LCN1P31025 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
LCN1P31025 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms