Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
COL5A2P05997 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
COL5A2P05997 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC29.92■■■□□ 2.38
COL5A2P05997 GXYLT1P5-201ENST00000614548 1189 ntBASIC29.92■■■□□ 2.38
COL5A2P05997 AC105233.4-201ENST00000642045 216 ntBASIC29.92■■■□□ 2.38
COL5A2P05997 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
COL5A2P05997 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
COL5A2P05997 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
COL5A2P05997 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
COL5A2P05997 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC29.9■■■□□ 2.38
COL5A2P05997 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC29.9■■■□□ 2.38
COL5A2P05997 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC29.9■■■□□ 2.38
COL5A2P05997 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC29.9■■■□□ 2.38
COL5A2P05997 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC29.9■■■□□ 2.38
COL5A2P05997 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC29.9■■■□□ 2.38
COL5A2P05997 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC29.9■■■□□ 2.38
COL5A2P05997 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC29.9■■■□□ 2.38
COL5A2P05997 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
COL5A2P05997 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
COL5A2P05997 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC29.89■■■□□ 2.38
COL5A2P05997 AC104771.1-201ENST00000603335 964 ntBASIC29.89■■■□□ 2.38
COL5A2P05997 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC29.89■■■□□ 2.38
COL5A2P05997 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC29.88■■■□□ 2.37
COL5A2P05997 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC29.88■■■□□ 2.37
COL5A2P05997 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
COL5A2P05997 ABHD17AP1-201ENST00000358206 933 ntBASIC29.88■■■□□ 2.37
COL5A2P05997 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC29.88■■■□□ 2.37
COL5A2P05997 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC29.88■■■□□ 2.37
COL5A2P05997 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
COL5A2P05997 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
COL5A2P05997 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
COL5A2P05997 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC29.87■■■□□ 2.37
COL5A2P05997 HSCB-202ENST00000398941 955 ntTSL 2 BASIC29.87■■■□□ 2.37
COL5A2P05997 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
COL5A2P05997 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC29.87■■■□□ 2.37
COL5A2P05997 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
COL5A2P05997 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC29.87■■■□□ 2.37
COL5A2P05997 AC137761.2-201ENST00000561729 223 ntBASIC29.87■■■□□ 2.37
COL5A2P05997 DUX4L4-201ENST00000566884 1269 ntBASIC29.87■■■□□ 2.37
COL5A2P05997 AC145350.3-201ENST00000569033 163 ntBASIC29.87■■■□□ 2.37
COL5A2P05997 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC29.87■■■□□ 2.37
COL5A2P05997 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC29.87■■■□□ 2.37
COL5A2P05997 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC29.87■■■□□ 2.37
COL5A2P05997 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
COL5A2P05997 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
COL5A2P05997 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC29.87■■■□□ 2.37
COL5A2P05997 GAS2L1P2-201ENST00000436355 1356 ntBASIC29.87■■■□□ 2.37
COL5A2P05997 STX7-201ENST00000367937 1090 ntTSL 5 BASIC29.87■■■□□ 2.37
COL5A2P05997 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC29.87■■■□□ 2.37
COL5A2P05997 DBI-210ENST00000542275 757 ntTSL 5 BASIC29.87■■■□□ 2.37
COL5A2P05997 GALNS-213ENST00000569433 723 ntTSL 3 BASIC29.87■■■□□ 2.37
COL5A2P05997 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC29.86■■■□□ 2.37
COL5A2P05997 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC29.86■■■□□ 2.37
COL5A2P05997 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC29.86■■■□□ 2.37
COL5A2P05997 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC29.86■■■□□ 2.37
COL5A2P05997 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
COL5A2P05997 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
COL5A2P05997 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
COL5A2P05997 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC29.86■■■□□ 2.37
COL5A2P05997 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
COL5A2P05997 AC016769.1-201ENST00000409132 1010 ntBASIC29.86■■■□□ 2.37
COL5A2P05997 MFF-208ENST00000409616 1247 ntTSL 5 BASIC29.86■■■□□ 2.37
COL5A2P05997 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC29.86■■■□□ 2.37
COL5A2P05997 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC29.86■■■□□ 2.37
COL5A2P05997 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC29.86■■■□□ 2.37
COL5A2P05997 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC29.85■■■□□ 2.37
COL5A2P05997 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
COL5A2P05997 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
COL5A2P05997 SHF-207ENST00000560540 2062 ntTSL 5 BASIC29.85■■■□□ 2.37
COL5A2P05997 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC29.85■■■□□ 2.37
COL5A2P05997 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
COL5A2P05997 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
COL5A2P05997 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC29.84■■■□□ 2.37
COL5A2P05997 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
COL5A2P05997 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC29.84■■■□□ 2.37
COL5A2P05997 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
COL5A2P05997 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC29.84■■■□□ 2.37
COL5A2P05997 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
COL5A2P05997 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC29.84■■■□□ 2.37
COL5A2P05997 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
COL5A2P05997 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC29.83■■■□□ 2.37
COL5A2P05997 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC29.83■■■□□ 2.37
COL5A2P05997 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC29.83■■■□□ 2.37
COL5A2P05997 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC29.83■■■□□ 2.37
COL5A2P05997 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
COL5A2P05997 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
COL5A2P05997 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
COL5A2P05997 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC29.83■■■□□ 2.37
COL5A2P05997 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
COL5A2P05997 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
COL5A2P05997 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC29.82■■■□□ 2.36
COL5A2P05997 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC29.82■■■□□ 2.36
COL5A2P05997 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC29.82■■■□□ 2.36
COL5A2P05997 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC29.82■■■□□ 2.36
COL5A2P05997 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
COL5A2P05997 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC29.82■■■□□ 2.36
COL5A2P05997 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC29.82■■■□□ 2.36
COL5A2P05997 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
COL5A2P05997 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC29.82■■■□□ 2.36
COL5A2P05997 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC29.82■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms