Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
HLA-DPB1P04440 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DPB1P04440 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DPB1P04440 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DPB1P04440 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DPB1P04440 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20■□□□□ 0.79
HLA-DPB1P04440 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
HLA-DPB1P04440 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DPB1P04440 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20■□□□□ 0.79
HLA-DPB1P04440 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20■□□□□ 0.79
HLA-DPB1P04440 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20■□□□□ 0.79
HLA-DPB1P04440 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20■□□□□ 0.79
HLA-DPB1P04440 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
HLA-DPB1P04440 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20■□□□□ 0.79
HLA-DPB1P04440 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DPB1P04440 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DPB1P04440 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DPB1P04440 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DPB1P04440 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.99■□□□□ 0.79
HLA-DPB1P04440 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
HLA-DPB1P04440 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.99■□□□□ 0.79
HLA-DPB1P04440 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DPB1P04440 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
HLA-DPB1P04440 AC090877.2-201ENST00000558441 1738 ntBASIC19.99■□□□□ 0.79
HLA-DPB1P04440 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DPB1P04440 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DPB1P04440 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.99■□□□□ 0.79
HLA-DPB1P04440 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DPB1P04440 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DPB1P04440 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.98■□□□□ 0.79
HLA-DPB1P04440 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.98■□□□□ 0.79
HLA-DPB1P04440 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DPB1P04440 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.98■□□□□ 0.79
HLA-DPB1P04440 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DPB1P04440 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DPB1P04440 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DPB1P04440 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DPB1P04440 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DPB1P04440 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DPB1P04440 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DPB1P04440 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
HLA-DPB1P04440 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
HLA-DPB1P04440 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.97■□□□□ 0.79
HLA-DPB1P04440 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DPB1P04440 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DPB1P04440 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DPB1P04440 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.97■□□□□ 0.79
HLA-DPB1P04440 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DPB1P04440 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
HLA-DPB1P04440 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.96■□□□□ 0.79
HLA-DPB1P04440 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.96■□□□□ 0.79
HLA-DPB1P04440 AC103834.1-201ENST00000520383 144 ntBASIC19.96■□□□□ 0.79
HLA-DPB1P04440 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DPB1P04440 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DPB1P04440 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.96■□□□□ 0.79
HLA-DPB1P04440 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DPB1P04440 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.95■□□□□ 0.78
HLA-DPB1P04440 AL024507.2-201ENST00000606070 2574 ntBASIC19.95■□□□□ 0.78
HLA-DPB1P04440 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DPB1P04440 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.95■□□□□ 0.78
HLA-DPB1P04440 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DPB1P04440 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DPB1P04440 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
HLA-DPB1P04440 AC022616.5-201ENST00000518796 181 ntBASIC19.95■□□□□ 0.78
HLA-DPB1P04440 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.95■□□□□ 0.78
HLA-DPB1P04440 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.95■□□□□ 0.78
HLA-DPB1P04440 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DPB1P04440 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
HLA-DPB1P04440 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DPB1P04440 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DPB1P04440 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.95■□□□□ 0.78
HLA-DPB1P04440 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
HLA-DPB1P04440 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DPB1P04440 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.94■□□□□ 0.78
HLA-DPB1P04440 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DPB1P04440 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.94■□□□□ 0.78
HLA-DPB1P04440 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DPB1P04440 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.94■□□□□ 0.78
HLA-DPB1P04440 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DPB1P04440 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
HLA-DPB1P04440 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.93■□□□□ 0.78
HLA-DPB1P04440 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DPB1P04440 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DPB1P04440 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.93■□□□□ 0.78
HLA-DPB1P04440 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
HLA-DPB1P04440 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.93■□□□□ 0.78
HLA-DPB1P04440 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DPB1P04440 YBX1P4-201ENST00000392794 808 ntBASIC19.93■□□□□ 0.78
HLA-DPB1P04440 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
HLA-DPB1P04440 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.93■□□□□ 0.78
HLA-DPB1P04440 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DPB1P04440 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DPB1P04440 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
HLA-DPB1P04440 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DPB1P04440 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DPB1P04440 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DPB1P04440 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DPB1P04440 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.92■□□□□ 0.78
HLA-DPB1P04440 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
HLA-DPB1P04440 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms