Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAF1P04049 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAF1P04049 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAF1P04049 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAF1P04049 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
RAF1P04049 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAF1P04049 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAF1P04049 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.08■□□□□ 0.81
RAF1P04049 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RAF1P04049 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
RAF1P04049 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RAF1P04049 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
RAF1P04049 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAF1P04049 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.07■□□□□ 0.8
RAF1P04049 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAF1P04049 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAF1P04049 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.07■□□□□ 0.8
RAF1P04049 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RAF1P04049 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAF1P04049 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAF1P04049 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.07■□□□□ 0.8
RAF1P04049 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAF1P04049 AF131216.4-201ENST00000638924 1588 ntBASIC20.07■□□□□ 0.8
RAF1P04049 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.07■□□□□ 0.8
RAF1P04049 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
RAF1P04049 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.07■□□□□ 0.8
RAF1P04049 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.06■□□□□ 0.8
RAF1P04049 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.06■□□□□ 0.8
RAF1P04049 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAF1P04049 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAF1P04049 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAF1P04049 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAF1P04049 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAF1P04049 UNC93B3-201ENST00000308076 687 ntBASIC20.06■□□□□ 0.8
RAF1P04049 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAF1P04049 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.06■□□□□ 0.8
RAF1P04049 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAF1P04049 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAF1P04049 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.06■□□□□ 0.8
RAF1P04049 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAF1P04049 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RAF1P04049 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.05■□□□□ 0.8
RAF1P04049 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAF1P04049 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.05■□□□□ 0.8
RAF1P04049 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAF1P04049 AL161729.1-201ENST00000604104 1402 ntBASIC20.05■□□□□ 0.8
RAF1P04049 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAF1P04049 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAF1P04049 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.05■□□□□ 0.8
RAF1P04049 AL136162.1-201ENST00000607711 1078 ntBASIC20.05■□□□□ 0.8
RAF1P04049 MIR5787-201ENST00000611784 55 ntBASIC20.05■□□□□ 0.8
RAF1P04049 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.05■□□□□ 0.8
RAF1P04049 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.05■□□□□ 0.8
RAF1P04049 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.05■□□□□ 0.8
RAF1P04049 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RAF1P04049 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAF1P04049 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAF1P04049 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAF1P04049 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAF1P04049 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.04■□□□□ 0.8
RAF1P04049 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.04■□□□□ 0.8
RAF1P04049 AC104564.3-201ENST00000582367 638 ntBASIC20.04■□□□□ 0.8
RAF1P04049 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.04■□□□□ 0.8
RAF1P04049 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.04■□□□□ 0.8
RAF1P04049 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAF1P04049 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAF1P04049 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RAF1P04049 AC135279.3-201ENST00000610945 1311 ntBASIC20.03■□□□□ 0.8
RAF1P04049 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAF1P04049 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.03■□□□□ 0.8
RAF1P04049 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RAF1P04049 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.03■□□□□ 0.8
RAF1P04049 LINC00565-201ENST00000562710 2331 ntBASIC20.03■□□□□ 0.8
RAF1P04049 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.03■□□□□ 0.8
RAF1P04049 AC026271.2-201ENST00000428091 497 ntBASIC20.03■□□□□ 0.8
RAF1P04049 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RAF1P04049 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RAF1P04049 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAF1P04049 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAF1P04049 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAF1P04049 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.03■□□□□ 0.8
RAF1P04049 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAF1P04049 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAF1P04049 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAF1P04049 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RAF1P04049 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.02■□□□□ 0.8
RAF1P04049 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.02■□□□□ 0.8
RAF1P04049 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RAF1P04049 MIR6722-201ENST00000617286 78 ntBASIC20.02■□□□□ 0.8
RAF1P04049 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.02■□□□□ 0.8
RAF1P04049 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RAF1P04049 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RAF1P04049 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAF1P04049 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RAF1P04049 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RAF1P04049 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAF1P04049 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RAF1P04049 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
RAF1P04049 ANOS2P-203ENST00000472227 1816 ntBASIC20.02■□□□□ 0.79
RAF1P04049 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms