Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV12-3P01733 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV12-3P01733 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.25■□□□□ 0.35
TRBV12-3P01733 C9orf163-202ENST00000624034 2573 ntBASIC17.25■□□□□ 0.35
TRBV12-3P01733 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV12-3P01733 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV12-3P01733 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.25■□□□□ 0.35
TRBV12-3P01733 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.25■□□□□ 0.35
TRBV12-3P01733 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.25■□□□□ 0.35
TRBV12-3P01733 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.25■□□□□ 0.35
TRBV12-3P01733 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV12-3P01733 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV12-3P01733 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV12-3P01733 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV12-3P01733 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV12-3P01733 LINC01529-204ENST00000636474 1715 ntBASIC17.24■□□□□ 0.35
TRBV12-3P01733 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TRBV12-3P01733 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV12-3P01733 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV12-3P01733 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TRBV12-3P01733 AC009086.3-201ENST00000623486 1008 ntBASIC17.24■□□□□ 0.35
TRBV12-3P01733 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV12-3P01733 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV12-3P01733 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV12-3P01733 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV12-3P01733 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TRBV12-3P01733 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV12-3P01733 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV12-3P01733 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TRBV12-3P01733 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TRBV12-3P01733 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.23■□□□□ 0.35
TRBV12-3P01733 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.23■□□□□ 0.35
TRBV12-3P01733 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TRBV12-3P01733 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV12-3P01733 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.23■□□□□ 0.35
TRBV12-3P01733 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV12-3P01733 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV12-3P01733 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV12-3P01733 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TRBV12-3P01733 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.23■□□□□ 0.35
TRBV12-3P01733 DUSP8P3-201ENST00000399571 1760 ntBASIC17.23■□□□□ 0.35
TRBV12-3P01733 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.22■□□□□ 0.35
TRBV12-3P01733 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.22■□□□□ 0.35
TRBV12-3P01733 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV12-3P01733 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV12-3P01733 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV12-3P01733 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV12-3P01733 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TRBV12-3P01733 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.22■□□□□ 0.35
TRBV12-3P01733 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV12-3P01733 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.22■□□□□ 0.35
TRBV12-3P01733 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV12-3P01733 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.22■□□□□ 0.35
TRBV12-3P01733 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV12-3P01733 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV12-3P01733 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.22■□□□□ 0.35
TRBV12-3P01733 FP325331.1-202ENST00000623531 1380 ntBASIC17.22■□□□□ 0.35
TRBV12-3P01733 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TRBV12-3P01733 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV12-3P01733 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.22■□□□□ 0.35
TRBV12-3P01733 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.21■□□□□ 0.35
TRBV12-3P01733 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV12-3P01733 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV12-3P01733 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.21■□□□□ 0.35
TRBV12-3P01733 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV12-3P01733 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TRBV12-3P01733 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV12-3P01733 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.21■□□□□ 0.35
TRBV12-3P01733 AC241377.3-202ENST00000626088 1088 ntBASIC17.21■□□□□ 0.35
TRBV12-3P01733 AC241585.3-202ENST00000628937 1088 ntBASIC17.21■□□□□ 0.35
TRBV12-3P01733 AC245100.8-202ENST00000629247 1058 ntBASIC17.21■□□□□ 0.35
TRBV12-3P01733 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRBV12-3P01733 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV12-3P01733 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV12-3P01733 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.21■□□□□ 0.34
TRBV12-3P01733 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TRBV12-3P01733 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV12-3P01733 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.2■□□□□ 0.34
TRBV12-3P01733 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV12-3P01733 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV12-3P01733 DUX4L4-201ENST00000566884 1269 ntBASIC17.2■□□□□ 0.34
TRBV12-3P01733 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TRBV12-3P01733 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.2■□□□□ 0.34
TRBV12-3P01733 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TRBV12-3P01733 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRBV12-3P01733 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.2■□□□□ 0.34
TRBV12-3P01733 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.2■□□□□ 0.34
TRBV12-3P01733 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV12-3P01733 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV12-3P01733 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV12-3P01733 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TRBV12-3P01733 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
TRBV12-3P01733 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV12-3P01733 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV12-3P01733 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV12-3P01733 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.19■□□□□ 0.34
TRBV12-3P01733 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV12-3P01733 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.19■□□□□ 0.34
TRBV12-3P01733 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.19■□□□□ 0.34
TRBV12-3P01733 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms