Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN1O95832 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.9■□□□□ 0.78
CLDN1O95832 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.9■□□□□ 0.78
CLDN1O95832 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN1O95832 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN1O95832 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN1O95832 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
CLDN1O95832 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN1O95832 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CLDN1O95832 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
CLDN1O95832 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN1O95832 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN1O95832 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.89■□□□□ 0.77
CLDN1O95832 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.89■□□□□ 0.77
CLDN1O95832 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CLDN1O95832 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.89■□□□□ 0.77
CLDN1O95832 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN1O95832 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN1O95832 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.89■□□□□ 0.77
CLDN1O95832 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.89■□□□□ 0.77
CLDN1O95832 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CLDN1O95832 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN1O95832 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN1O95832 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN1O95832 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN1O95832 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN1O95832 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.88■□□□□ 0.77
CLDN1O95832 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CLDN1O95832 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN1O95832 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.88■□□□□ 0.77
CLDN1O95832 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CLDN1O95832 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.88■□□□□ 0.77
CLDN1O95832 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN1O95832 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.88■□□□□ 0.77
CLDN1O95832 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.87■□□□□ 0.77
CLDN1O95832 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN1O95832 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.87■□□□□ 0.77
CLDN1O95832 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN1O95832 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN1O95832 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.87■□□□□ 0.77
CLDN1O95832 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN1O95832 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.87■□□□□ 0.77
CLDN1O95832 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CLDN1O95832 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.87■□□□□ 0.77
CLDN1O95832 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.87■□□□□ 0.77
CLDN1O95832 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN1O95832 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN1O95832 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.86■□□□□ 0.77
CLDN1O95832 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CLDN1O95832 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN1O95832 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.86■□□□□ 0.77
CLDN1O95832 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN1O95832 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.86■□□□□ 0.77
CLDN1O95832 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.86■□□□□ 0.77
CLDN1O95832 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CLDN1O95832 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CLDN1O95832 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN1O95832 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.85■□□□□ 0.77
CLDN1O95832 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN1O95832 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.85■□□□□ 0.77
CLDN1O95832 AC026185.1-201ENST00000445748 174 ntBASIC19.85■□□□□ 0.77
CLDN1O95832 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CLDN1O95832 AL109923.1-201ENST00000618799 583 ntBASIC19.85■□□□□ 0.77
CLDN1O95832 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN1O95832 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN1O95832 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN1O95832 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.85■□□□□ 0.77
CLDN1O95832 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN1O95832 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CLDN1O95832 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.84■□□□□ 0.77
CLDN1O95832 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN1O95832 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN1O95832 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN1O95832 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.84■□□□□ 0.77
CLDN1O95832 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN1O95832 AC016769.1-201ENST00000409132 1010 ntBASIC19.84■□□□□ 0.77
CLDN1O95832 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.84■□□□□ 0.77
CLDN1O95832 KRT18P61-201ENST00000585825 1298 ntBASIC19.84■□□□□ 0.77
CLDN1O95832 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CLDN1O95832 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CLDN1O95832 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.84■□□□□ 0.77
CLDN1O95832 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
CLDN1O95832 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CLDN1O95832 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CLDN1O95832 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN1O95832 AC096887.2-201ENST00000623443 1957 ntBASIC19.83■□□□□ 0.77
CLDN1O95832 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN1O95832 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CLDN1O95832 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN1O95832 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CLDN1O95832 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.83■□□□□ 0.77
CLDN1O95832 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN1O95832 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN1O95832 AC137761.2-201ENST00000561729 223 ntBASIC19.83■□□□□ 0.77
CLDN1O95832 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.83■□□□□ 0.77
CLDN1O95832 AC145350.3-201ENST00000569033 163 ntBASIC19.83■□□□□ 0.77
CLDN1O95832 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN1O95832 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
CLDN1O95832 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.83■□□□□ 0.76
CLDN1O95832 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms