Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPNE6O95741 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPNE6O95741 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPNE6O95741 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPNE6O95741 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPNE6O95741 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.87■■□□□ 1.09
CPNE6O95741 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPNE6O95741 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CPNE6O95741 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CPNE6O95741 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CPNE6O95741 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CPNE6O95741 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CPNE6O95741 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.86■■□□□ 1.09
CPNE6O95741 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.86■■□□□ 1.09
CPNE6O95741 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.86■■□□□ 1.09
CPNE6O95741 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.86■■□□□ 1.09
CPNE6O95741 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPNE6O95741 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPNE6O95741 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.85■■□□□ 1.09
CPNE6O95741 AC026271.2-201ENST00000428091 497 ntBASIC21.85■■□□□ 1.09
CPNE6O95741 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.85■■□□□ 1.09
CPNE6O95741 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.85■■□□□ 1.09
CPNE6O95741 CA15P2-201ENST00000611168 834 ntBASIC21.85■■□□□ 1.09
CPNE6O95741 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPNE6O95741 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.85■■□□□ 1.09
CPNE6O95741 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPNE6O95741 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPNE6O95741 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
CPNE6O95741 AC009086.3-201ENST00000623486 1008 ntBASIC21.84■■□□□ 1.09
CPNE6O95741 AC136469.2-201ENST00000623944 1028 ntBASIC21.84■■□□□ 1.09
CPNE6O95741 AP003733.4-201ENST00000623785 1697 ntBASIC21.84■■□□□ 1.09
CPNE6O95741 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPNE6O95741 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPNE6O95741 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPNE6O95741 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPNE6O95741 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.84■■□□□ 1.09
CPNE6O95741 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CPNE6O95741 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CPNE6O95741 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPNE6O95741 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
CPNE6O95741 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CPNE6O95741 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.83■■□□□ 1.09
CPNE6O95741 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CPNE6O95741 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CPNE6O95741 ALDH1A3-203ENST00000557963 1670 ntBASIC21.83■■□□□ 1.09
CPNE6O95741 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CPNE6O95741 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.83■■□□□ 1.09
CPNE6O95741 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.83■■□□□ 1.09
CPNE6O95741 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.83■■□□□ 1.09
CPNE6O95741 AC008764.7-201ENST00000593779 1081 ntBASIC21.83■■□□□ 1.09
CPNE6O95741 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CPNE6O95741 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CPNE6O95741 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.83■■□□□ 1.08
CPNE6O95741 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CPNE6O95741 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CPNE6O95741 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPNE6O95741 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPNE6O95741 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPNE6O95741 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPNE6O95741 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPNE6O95741 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPNE6O95741 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPNE6O95741 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CPNE6O95741 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPNE6O95741 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.82■■□□□ 1.08
CPNE6O95741 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.81■■□□□ 1.08
CPNE6O95741 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.81■■□□□ 1.08
CPNE6O95741 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPNE6O95741 AC006455.2-201ENST00000429931 906 ntBASIC21.81■■□□□ 1.08
CPNE6O95741 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.81■■□□□ 1.08
CPNE6O95741 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPNE6O95741 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPNE6O95741 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CPNE6O95741 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.81■■□□□ 1.08
CPNE6O95741 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPNE6O95741 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CPNE6O95741 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CPNE6O95741 MIR5787-201ENST00000611784 55 ntBASIC21.8■■□□□ 1.08
CPNE6O95741 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.8■■□□□ 1.08
CPNE6O95741 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CPNE6O95741 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPNE6O95741 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE6O95741 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE6O95741 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE6O95741 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE6O95741 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE6O95741 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.79■■□□□ 1.08
CPNE6O95741 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.79■■□□□ 1.08
CPNE6O95741 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE6O95741 AC099791.1-201ENST00000416440 715 ntBASIC21.79■■□□□ 1.08
CPNE6O95741 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.79■■□□□ 1.08
CPNE6O95741 MIR3181-201ENST00000578512 73 ntBASIC21.79■■□□□ 1.08
CPNE6O95741 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.79■■□□□ 1.08
CPNE6O95741 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.79■■□□□ 1.08
CPNE6O95741 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.79■■□□□ 1.08
CPNE6O95741 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE6O95741 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE6O95741 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.79■■□□□ 1.08
CPNE6O95741 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CPNE6O95741 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms