Protein–RNA interactions for Protein: O75900

MMP23A, Matrix metalloproteinase-23, humanhuman

Predictions only

Length 390 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP23AO75900 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP23AO75900 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP23AO75900 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP23AO75900 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP23AO75900 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MMP23AO75900 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP23AO75900 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.39■□□□□ 0.53
MMP23AO75900 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP23AO75900 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.39■□□□□ 0.53
MMP23AO75900 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.39■□□□□ 0.53
MMP23AO75900 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP23AO75900 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP23AO75900 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
MMP23AO75900 C17orf82-201ENST00000623772 1530 ntBASIC18.39■□□□□ 0.53
MMP23AO75900 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP23AO75900 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.38■□□□□ 0.53
MMP23AO75900 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP23AO75900 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP23AO75900 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MMP23AO75900 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MMP23AO75900 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.38■□□□□ 0.53
MMP23AO75900 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.38■□□□□ 0.53
MMP23AO75900 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.38■□□□□ 0.53
MMP23AO75900 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.38■□□□□ 0.53
MMP23AO75900 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP23AO75900 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.38■□□□□ 0.53
MMP23AO75900 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP23AO75900 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
MMP23AO75900 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
MMP23AO75900 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.37■□□□□ 0.53
MMP23AO75900 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MMP23AO75900 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MMP23AO75900 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MMP23AO75900 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.37■□□□□ 0.53
MMP23AO75900 AL512631.2-201ENST00000604634 923 ntBASIC18.37■□□□□ 0.53
MMP23AO75900 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.37■□□□□ 0.53
MMP23AO75900 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
MMP23AO75900 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
MMP23AO75900 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.37■□□□□ 0.53
MMP23AO75900 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MMP23AO75900 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MMP23AO75900 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MMP23AO75900 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.36■□□□□ 0.53
MMP23AO75900 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.36■□□□□ 0.53
MMP23AO75900 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MMP23AO75900 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.36■□□□□ 0.53
MMP23AO75900 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.36■□□□□ 0.53
MMP23AO75900 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.36■□□□□ 0.53
MMP23AO75900 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
MMP23AO75900 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP23AO75900 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.35■□□□□ 0.53
MMP23AO75900 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MMP23AO75900 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.35■□□□□ 0.53
MMP23AO75900 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.35■□□□□ 0.53
MMP23AO75900 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.35■□□□□ 0.53
MMP23AO75900 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.35■□□□□ 0.53
MMP23AO75900 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.35■□□□□ 0.53
MMP23AO75900 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.35■□□□□ 0.53
MMP23AO75900 AC068473.5-201ENST00000616428 2072 ntBASIC18.35■□□□□ 0.53
MMP23AO75900 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.35■□□□□ 0.53
MMP23AO75900 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MMP23AO75900 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP23AO75900 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
MMP23AO75900 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP23AO75900 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MMP23AO75900 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP23AO75900 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
MMP23AO75900 AC131212.1-201ENST00000613771 668 ntBASIC18.34■□□□□ 0.53
MMP23AO75900 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.34■□□□□ 0.53
MMP23AO75900 LINC01529-204ENST00000636474 1715 ntBASIC18.34■□□□□ 0.53
MMP23AO75900 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP23AO75900 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.34■□□□□ 0.53
MMP23AO75900 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.34■□□□□ 0.53
MMP23AO75900 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP23AO75900 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.53
MMP23AO75900 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
MMP23AO75900 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.33■□□□□ 0.53
MMP23AO75900 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.33■□□□□ 0.53
MMP23AO75900 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.33■□□□□ 0.53
MMP23AO75900 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
MMP23AO75900 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.33■□□□□ 0.53
MMP23AO75900 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.33■□□□□ 0.53
MMP23AO75900 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
MMP23AO75900 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MMP23AO75900 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MMP23AO75900 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MMP23AO75900 MIR4466-201ENST00000606121 54 ntBASIC18.33■□□□□ 0.52
MMP23AO75900 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
MMP23AO75900 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
MMP23AO75900 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
MMP23AO75900 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
MMP23AO75900 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP23AO75900 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
MMP23AO75900 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MMP23AO75900 FP325331.1-202ENST00000623531 1380 ntBASIC18.32■□□□□ 0.52
MMP23AO75900 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP23AO75900 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
MMP23AO75900 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
MMP23AO75900 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
MMP23AO75900 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms