Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
GDF9O60383 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
GDF9O60383 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
GDF9O60383 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
GDF9O60383 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.97■■□□□ 1.11
GDF9O60383 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.97■■□□□ 1.11
GDF9O60383 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
GDF9O60383 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.97■■□□□ 1.11
GDF9O60383 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.97■■□□□ 1.11
GDF9O60383 MIR663A-201ENST00000385250 93 ntBASIC21.97■■□□□ 1.11
GDF9O60383 GPX1P1-201ENST00000388829 606 ntBASIC21.97■■□□□ 1.11
GDF9O60383 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
GDF9O60383 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
GDF9O60383 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
GDF9O60383 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.97■■□□□ 1.11
GDF9O60383 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
GDF9O60383 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.97■■□□□ 1.11
GDF9O60383 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
GDF9O60383 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
GDF9O60383 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.97■■□□□ 1.11
GDF9O60383 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
GDF9O60383 AP004607.4-201ENST00000530158 1459 ntBASIC21.96■■□□□ 1.11
GDF9O60383 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
GDF9O60383 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.96■■□□□ 1.11
GDF9O60383 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.96■■□□□ 1.11
GDF9O60383 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
GDF9O60383 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.96■■□□□ 1.11
GDF9O60383 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.96■■□□□ 1.11
GDF9O60383 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.96■■□□□ 1.11
GDF9O60383 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
GDF9O60383 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.96■■□□□ 1.11
GDF9O60383 AC004854.2-201ENST00000608450 1441 ntBASIC21.96■■□□□ 1.11
GDF9O60383 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
GDF9O60383 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
GDF9O60383 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.96■■□□□ 1.11
GDF9O60383 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.11
GDF9O60383 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.95■■□□□ 1.11
GDF9O60383 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
GDF9O60383 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.95■■□□□ 1.1
GDF9O60383 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.95■■□□□ 1.1
GDF9O60383 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
GDF9O60383 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
GDF9O60383 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
GDF9O60383 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
GDF9O60383 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
GDF9O60383 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GDF9O60383 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GDF9O60383 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.94■■□□□ 1.1
GDF9O60383 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.94■■□□□ 1.1
GDF9O60383 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
GDF9O60383 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.94■■□□□ 1.1
GDF9O60383 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
GDF9O60383 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
GDF9O60383 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
GDF9O60383 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
GDF9O60383 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
GDF9O60383 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.93■■□□□ 1.1
GDF9O60383 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
GDF9O60383 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
GDF9O60383 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
GDF9O60383 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.93■■□□□ 1.1
GDF9O60383 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.93■■□□□ 1.1
GDF9O60383 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
GDF9O60383 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
GDF9O60383 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.93■■□□□ 1.1
GDF9O60383 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
GDF9O60383 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.92■■□□□ 1.1
GDF9O60383 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
GDF9O60383 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
GDF9O60383 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
GDF9O60383 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
GDF9O60383 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.92■■□□□ 1.1
GDF9O60383 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
GDF9O60383 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
GDF9O60383 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
GDF9O60383 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
GDF9O60383 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
GDF9O60383 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
GDF9O60383 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.92■■□□□ 1.1
GDF9O60383 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
GDF9O60383 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
GDF9O60383 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.92■■□□□ 1.1
GDF9O60383 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.92■■□□□ 1.1
GDF9O60383 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
GDF9O60383 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
GDF9O60383 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
GDF9O60383 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
GDF9O60383 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
GDF9O60383 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.91■■□□□ 1.1
GDF9O60383 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.91■■□□□ 1.1
GDF9O60383 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
GDF9O60383 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
GDF9O60383 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.91■■□□□ 1.1
GDF9O60383 AC011767.1-201ENST00000617410 1153 ntBASIC21.91■■□□□ 1.1
GDF9O60383 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
GDF9O60383 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
GDF9O60383 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
GDF9O60383 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
GDF9O60383 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
GDF9O60383 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms