Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMAD9O15198 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SMAD9O15198 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMAD9O15198 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMAD9O15198 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SMAD9O15198 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMAD9O15198 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMAD9O15198 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMAD9O15198 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SMAD9O15198 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMAD9O15198 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMAD9O15198 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.13■□□□□ 0.81
SMAD9O15198 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
SMAD9O15198 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMAD9O15198 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMAD9O15198 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SMAD9O15198 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SMAD9O15198 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMAD9O15198 C17orf82-201ENST00000623772 1530 ntBASIC20.12■□□□□ 0.81
SMAD9O15198 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SMAD9O15198 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMAD9O15198 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.12■□□□□ 0.81
SMAD9O15198 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMAD9O15198 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMAD9O15198 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMAD9O15198 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMAD9O15198 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMAD9O15198 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMAD9O15198 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SMAD9O15198 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.11■□□□□ 0.81
SMAD9O15198 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SMAD9O15198 AC008406.3-201ENST00000620001 1374 ntBASIC20.11■□□□□ 0.81
SMAD9O15198 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SMAD9O15198 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.11■□□□□ 0.81
SMAD9O15198 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.11■□□□□ 0.81
SMAD9O15198 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMAD9O15198 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
SMAD9O15198 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMAD9O15198 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SMAD9O15198 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMAD9O15198 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
SMAD9O15198 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SMAD9O15198 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
SMAD9O15198 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SMAD9O15198 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.1■□□□□ 0.81
SMAD9O15198 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SMAD9O15198 AL136116.3-201ENST00000402907 1138 ntBASIC20.1■□□□□ 0.81
SMAD9O15198 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SMAD9O15198 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
SMAD9O15198 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.1■□□□□ 0.81
SMAD9O15198 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SMAD9O15198 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.1■□□□□ 0.81
SMAD9O15198 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.1■□□□□ 0.81
SMAD9O15198 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SMAD9O15198 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SMAD9O15198 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMAD9O15198 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.09■□□□□ 0.81
SMAD9O15198 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SMAD9O15198 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.09■□□□□ 0.81
SMAD9O15198 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMAD9O15198 SRD5A1P1-201ENST00000442297 786 ntBASIC20.09■□□□□ 0.81
SMAD9O15198 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.09■□□□□ 0.81
SMAD9O15198 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMAD9O15198 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMAD9O15198 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMAD9O15198 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.08■□□□□ 0.81
SMAD9O15198 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.08■□□□□ 0.81
SMAD9O15198 AC068473.5-201ENST00000616428 2072 ntBASIC20.08■□□□□ 0.81
SMAD9O15198 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMAD9O15198 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SMAD9O15198 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
SMAD9O15198 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SMAD9O15198 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
SMAD9O15198 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SMAD9O15198 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.07■□□□□ 0.8
SMAD9O15198 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMAD9O15198 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SMAD9O15198 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
SMAD9O15198 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMAD9O15198 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMAD9O15198 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.07■□□□□ 0.8
SMAD9O15198 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SMAD9O15198 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMAD9O15198 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.07■□□□□ 0.8
SMAD9O15198 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SMAD9O15198 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMAD9O15198 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMAD9O15198 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.06■□□□□ 0.8
SMAD9O15198 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMAD9O15198 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMAD9O15198 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SMAD9O15198 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.06■□□□□ 0.8
SMAD9O15198 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.06■□□□□ 0.8
SMAD9O15198 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SMAD9O15198 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SMAD9O15198 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMAD9O15198 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMAD9O15198 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SMAD9O15198 AC079630.1-202ENST00000618127 1840 ntBASIC20.06■□□□□ 0.8
SMAD9O15198 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms