Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CASQ2O14958 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
CASQ2O14958 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CASQ2O14958 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.18■□□□□ 0.98
CASQ2O14958 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CASQ2O14958 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.18■□□□□ 0.98
CASQ2O14958 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CASQ2O14958 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CASQ2O14958 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.18■□□□□ 0.98
CASQ2O14958 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CASQ2O14958 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CASQ2O14958 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CASQ2O14958 DUX4L29-201ENST00000425409 679 ntBASIC21.17■□□□□ 0.98
CASQ2O14958 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.17■□□□□ 0.98
CASQ2O14958 AC044849.2-201ENST00000606596 710 ntBASIC21.17■□□□□ 0.98
CASQ2O14958 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CASQ2O14958 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.17■□□□□ 0.98
CASQ2O14958 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.17■□□□□ 0.98
CASQ2O14958 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CASQ2O14958 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CASQ2O14958 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CASQ2O14958 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CASQ2O14958 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CASQ2O14958 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CASQ2O14958 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
CASQ2O14958 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CASQ2O14958 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CASQ2O14958 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CASQ2O14958 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CASQ2O14958 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.16■□□□□ 0.98
CASQ2O14958 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.15■□□□□ 0.98
CASQ2O14958 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CASQ2O14958 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CASQ2O14958 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CASQ2O14958 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CASQ2O14958 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CASQ2O14958 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CASQ2O14958 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
CASQ2O14958 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CASQ2O14958 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CASQ2O14958 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.15■□□□□ 0.98
CASQ2O14958 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CASQ2O14958 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CASQ2O14958 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CASQ2O14958 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.15■□□□□ 0.98
CASQ2O14958 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CASQ2O14958 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CASQ2O14958 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CASQ2O14958 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.14■□□□□ 0.97
CASQ2O14958 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CASQ2O14958 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CASQ2O14958 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CASQ2O14958 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.13■□□□□ 0.97
CASQ2O14958 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CASQ2O14958 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CASQ2O14958 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CASQ2O14958 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CASQ2O14958 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CASQ2O14958 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CASQ2O14958 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CASQ2O14958 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CASQ2O14958 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CASQ2O14958 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.13■□□□□ 0.97
CASQ2O14958 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CASQ2O14958 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CASQ2O14958 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CASQ2O14958 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CASQ2O14958 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CASQ2O14958 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CASQ2O14958 LINC01971-201ENST00000617888 1048 ntBASIC21.12■□□□□ 0.97
CASQ2O14958 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.12■□□□□ 0.97
CASQ2O14958 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.12■□□□□ 0.97
CASQ2O14958 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CASQ2O14958 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CASQ2O14958 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CASQ2O14958 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CASQ2O14958 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CASQ2O14958 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.12■□□□□ 0.97
CASQ2O14958 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CASQ2O14958 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CASQ2O14958 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CASQ2O14958 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CASQ2O14958 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CASQ2O14958 AC025884.2-201ENST00000553429 711 ntBASIC21.11■□□□□ 0.97
CASQ2O14958 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CASQ2O14958 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CASQ2O14958 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CASQ2O14958 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CASQ2O14958 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CASQ2O14958 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.11■□□□□ 0.97
CASQ2O14958 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CASQ2O14958 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.11■□□□□ 0.97
CASQ2O14958 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CASQ2O14958 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.11■□□□□ 0.97
CASQ2O14958 AC079630.1-202ENST00000618127 1840 ntBASIC21.11■□□□□ 0.97
CASQ2O14958 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.1■□□□□ 0.97
CASQ2O14958 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CASQ2O14958 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CASQ2O14958 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CASQ2O14958 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms