Protein–RNA interactions for Protein: B3KS81

SRRM5, Serine/arginine repetitive matrix protein 5, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM5B3KS81 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SRRM5B3KS81 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SRRM5B3KS81 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SRRM5B3KS81 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.77■□□□□ 0.6
SRRM5B3KS81 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.77■□□□□ 0.6
SRRM5B3KS81 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SRRM5B3KS81 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.77■□□□□ 0.6
SRRM5B3KS81 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SRRM5B3KS81 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SRRM5B3KS81 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.59
SRRM5B3KS81 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.77■□□□□ 0.59
SRRM5B3KS81 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SRRM5B3KS81 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.59
SRRM5B3KS81 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.76■□□□□ 0.59
SRRM5B3KS81 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SRRM5B3KS81 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.76■□□□□ 0.59
SRRM5B3KS81 SRD5A1P1-201ENST00000442297 786 ntBASIC18.76■□□□□ 0.59
SRRM5B3KS81 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SRRM5B3KS81 AL139246.5-201ENST00000606645 996 ntBASIC18.76■□□□□ 0.59
SRRM5B3KS81 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SRRM5B3KS81 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SRRM5B3KS81 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.75■□□□□ 0.59
SRRM5B3KS81 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SRRM5B3KS81 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SRRM5B3KS81 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SRRM5B3KS81 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SRRM5B3KS81 MIR4466-201ENST00000606121 54 ntBASIC18.75■□□□□ 0.59
SRRM5B3KS81 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.75■□□□□ 0.59
SRRM5B3KS81 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.75■□□□□ 0.59
SRRM5B3KS81 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SRRM5B3KS81 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SRRM5B3KS81 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SRRM5B3KS81 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SRRM5B3KS81 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.75■□□□□ 0.59
SRRM5B3KS81 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SRRM5B3KS81 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SRRM5B3KS81 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.74■□□□□ 0.59
SRRM5B3KS81 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SRRM5B3KS81 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SRRM5B3KS81 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.74■□□□□ 0.59
SRRM5B3KS81 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SRRM5B3KS81 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.74■□□□□ 0.59
SRRM5B3KS81 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.74■□□□□ 0.59
SRRM5B3KS81 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SRRM5B3KS81 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SRRM5B3KS81 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.74■□□□□ 0.59
SRRM5B3KS81 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.74■□□□□ 0.59
SRRM5B3KS81 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
SRRM5B3KS81 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SRRM5B3KS81 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
SRRM5B3KS81 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.73■□□□□ 0.59
SRRM5B3KS81 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SRRM5B3KS81 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
SRRM5B3KS81 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
SRRM5B3KS81 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.73■□□□□ 0.59
SRRM5B3KS81 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SRRM5B3KS81 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.73■□□□□ 0.59
SRRM5B3KS81 MIR638-201ENST00000385237 100 ntBASIC18.73■□□□□ 0.59
SRRM5B3KS81 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.73■□□□□ 0.59
SRRM5B3KS81 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SRRM5B3KS81 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.73■□□□□ 0.59
SRRM5B3KS81 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SRRM5B3KS81 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.73■□□□□ 0.59
SRRM5B3KS81 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.73■□□□□ 0.59
SRRM5B3KS81 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SRRM5B3KS81 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.73■□□□□ 0.59
SRRM5B3KS81 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SRRM5B3KS81 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SRRM5B3KS81 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SRRM5B3KS81 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.72■□□□□ 0.59
SRRM5B3KS81 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.72■□□□□ 0.59
SRRM5B3KS81 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SRRM5B3KS81 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SRRM5B3KS81 AC092171.4-201ENST00000609130 632 ntBASIC18.72■□□□□ 0.59
SRRM5B3KS81 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.72■□□□□ 0.59
SRRM5B3KS81 AC009086.3-201ENST00000623486 1008 ntBASIC18.72■□□□□ 0.59
SRRM5B3KS81 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SRRM5B3KS81 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.72■□□□□ 0.59
SRRM5B3KS81 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.72■□□□□ 0.59
SRRM5B3KS81 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
SRRM5B3KS81 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SRRM5B3KS81 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRRM5B3KS81 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRRM5B3KS81 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRRM5B3KS81 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SRRM5B3KS81 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.71■□□□□ 0.59
SRRM5B3KS81 AC099791.2-201ENST00000605725 427 ntBASIC18.71■□□□□ 0.59
SRRM5B3KS81 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRRM5B3KS81 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRRM5B3KS81 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SRRM5B3KS81 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRRM5B3KS81 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
SRRM5B3KS81 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.7■□□□□ 0.58
SRRM5B3KS81 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.7■□□□□ 0.58
SRRM5B3KS81 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRRM5B3KS81 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRRM5B3KS81 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRRM5B3KS81 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRRM5B3KS81 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.7■□□□□ 0.58
SRRM5B3KS81 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms