Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLCA1A8K7I4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLCA1A8K7I4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
CLCA1A8K7I4 AC137767.1-201ENST00000602918 1920 ntBASIC20.76■□□□□ 0.91
CLCA1A8K7I4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.76■□□□□ 0.91
CLCA1A8K7I4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CLCA1A8K7I4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLCA1A8K7I4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLCA1A8K7I4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLCA1A8K7I4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.75■□□□□ 0.91
CLCA1A8K7I4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLCA1A8K7I4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.75■□□□□ 0.91
CLCA1A8K7I4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.75■□□□□ 0.91
CLCA1A8K7I4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.75■□□□□ 0.91
CLCA1A8K7I4 SNX5-217ENST00000606557 1087 ntBASIC20.75■□□□□ 0.91
CLCA1A8K7I4 MIR6724-1-201ENST00000616420 92 ntBASIC20.75■□□□□ 0.91
CLCA1A8K7I4 MIR6724-2-201ENST00000616483 92 ntBASIC20.75■□□□□ 0.91
CLCA1A8K7I4 MIR6724-4-201ENST00000617390 92 ntBASIC20.75■□□□□ 0.91
CLCA1A8K7I4 MIR6724-3-201ENST00000622482 92 ntBASIC20.75■□□□□ 0.91
CLCA1A8K7I4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.75■□□□□ 0.91
CLCA1A8K7I4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.75■□□□□ 0.91
CLCA1A8K7I4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLCA1A8K7I4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLCA1A8K7I4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CLCA1A8K7I4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CLCA1A8K7I4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLCA1A8K7I4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.74■□□□□ 0.91
CLCA1A8K7I4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.74■□□□□ 0.91
CLCA1A8K7I4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.74■□□□□ 0.91
CLCA1A8K7I4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.74■□□□□ 0.91
CLCA1A8K7I4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLCA1A8K7I4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CLCA1A8K7I4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLCA1A8K7I4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLCA1A8K7I4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.74■□□□□ 0.91
CLCA1A8K7I4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.74■□□□□ 0.91
CLCA1A8K7I4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCA1A8K7I4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.73■□□□□ 0.91
CLCA1A8K7I4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCA1A8K7I4 ECEL1P1-201ENST00000373592 1742 ntBASIC20.73■□□□□ 0.91
CLCA1A8K7I4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCA1A8K7I4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCA1A8K7I4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLCA1A8K7I4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCA1A8K7I4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.73■□□□□ 0.91
CLCA1A8K7I4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLCA1A8K7I4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCA1A8K7I4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCA1A8K7I4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCA1A8K7I4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLCA1A8K7I4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCA1A8K7I4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCA1A8K7I4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCA1A8K7I4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCA1A8K7I4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCA1A8K7I4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCA1A8K7I4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLCA1A8K7I4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.72■□□□□ 0.91
CLCA1A8K7I4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.72■□□□□ 0.91
CLCA1A8K7I4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCA1A8K7I4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCA1A8K7I4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCA1A8K7I4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCA1A8K7I4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.71■□□□□ 0.91
CLCA1A8K7I4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCA1A8K7I4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.71■□□□□ 0.91
CLCA1A8K7I4 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.71■□□□□ 0.91
CLCA1A8K7I4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.71■□□□□ 0.91
CLCA1A8K7I4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCA1A8K7I4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.71■□□□□ 0.91
CLCA1A8K7I4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCA1A8K7I4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCA1A8K7I4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCA1A8K7I4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCA1A8K7I4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CLCA1A8K7I4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.71■□□□□ 0.91
CLCA1A8K7I4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCA1A8K7I4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.71■□□□□ 0.91
CLCA1A8K7I4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.71■□□□□ 0.91
CLCA1A8K7I4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCA1A8K7I4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCA1A8K7I4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CLCA1A8K7I4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCA1A8K7I4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLCA1A8K7I4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.7■□□□□ 0.9
CLCA1A8K7I4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCA1A8K7I4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLCA1A8K7I4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCA1A8K7I4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCA1A8K7I4 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCA1A8K7I4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCA1A8K7I4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.7■□□□□ 0.9
CLCA1A8K7I4 AL117332.1-201ENST00000622628 974 ntBASIC20.7■□□□□ 0.9
CLCA1A8K7I4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLCA1A8K7I4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCA1A8K7I4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCA1A8K7I4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCA1A8K7I4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCA1A8K7I4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
CLCA1A8K7I4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms