Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC16.02■□□□□ 0.16
TRAV4A0A0B4J268 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV4A0A0B4J268 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV4A0A0B4J268 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV4A0A0B4J268 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV4A0A0B4J268 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC16.02■□□□□ 0.15
TRAV4A0A0B4J268 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV4A0A0B4J268 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.15
TRAV4A0A0B4J268 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV4A0A0B4J268 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRAV4A0A0B4J268 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRAV4A0A0B4J268 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRAV4A0A0B4J268 RARRES2P1-201ENST00000474487 481 ntBASIC16.01■□□□□ 0.15
TRAV4A0A0B4J268 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV4A0A0B4J268 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC16.01■□□□□ 0.15
TRAV4A0A0B4J268 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TRAV4A0A0B4J268 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV4A0A0B4J268 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV4A0A0B4J268 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV4A0A0B4J268 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV4A0A0B4J268 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC16■□□□□ 0.15
TRAV4A0A0B4J268 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV4A0A0B4J268 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV4A0A0B4J268 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
TRAV4A0A0B4J268 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV4A0A0B4J268 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC16■□□□□ 0.15
TRAV4A0A0B4J268 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC16■□□□□ 0.15
TRAV4A0A0B4J268 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC16■□□□□ 0.15
TRAV4A0A0B4J268 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC16■□□□□ 0.15
TRAV4A0A0B4J268 AC092028.1-203ENST00000608262 953 ntBASIC16■□□□□ 0.15
TRAV4A0A0B4J268 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV4A0A0B4J268 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV4A0A0B4J268 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV4A0A0B4J268 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
TRAV4A0A0B4J268 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV4A0A0B4J268 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC15.99■□□□□ 0.15
TRAV4A0A0B4J268 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV4A0A0B4J268 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC15.99■□□□□ 0.15
TRAV4A0A0B4J268 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV4A0A0B4J268 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV4A0A0B4J268 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV4A0A0B4J268 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV4A0A0B4J268 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV4A0A0B4J268 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
TRAV4A0A0B4J268 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV4A0A0B4J268 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TRAV4A0A0B4J268 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV4A0A0B4J268 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV4A0A0B4J268 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV4A0A0B4J268 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV4A0A0B4J268 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV4A0A0B4J268 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV4A0A0B4J268 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV4A0A0B4J268 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV4A0A0B4J268 MTDHP2-201ENST00000601468 714 ntBASIC15.98■□□□□ 0.15
TRAV4A0A0B4J268 MIR4787-201ENST00000607364 84 ntBASIC15.98■□□□□ 0.15
TRAV4A0A0B4J268 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV4A0A0B4J268 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV4A0A0B4J268 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV4A0A0B4J268 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TRAV4A0A0B4J268 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV4A0A0B4J268 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV4A0A0B4J268 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV4A0A0B4J268 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV4A0A0B4J268 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV4A0A0B4J268 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV4A0A0B4J268 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV4A0A0B4J268 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV4A0A0B4J268 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV4A0A0B4J268 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
TRAV4A0A0B4J268 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
TRAV4A0A0B4J268 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV4A0A0B4J268 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV4A0A0B4J268 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV4A0A0B4J268 C9orf163-202ENST00000624034 2573 ntBASIC15.97■□□□□ 0.15
TRAV4A0A0B4J268 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV4A0A0B4J268 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV4A0A0B4J268 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV4A0A0B4J268 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV4A0A0B4J268 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV4A0A0B4J268 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TRAV4A0A0B4J268 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV4A0A0B4J268 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TRAV4A0A0B4J268 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC15.96■□□□□ 0.15
TRAV4A0A0B4J268 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC15.96■□□□□ 0.15
TRAV4A0A0B4J268 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV4A0A0B4J268 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV4A0A0B4J268 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV4A0A0B4J268 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV4A0A0B4J268 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV4A0A0B4J268 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
TRAV4A0A0B4J268 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
TRAV4A0A0B4J268 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC15.96■□□□□ 0.15
TRAV4A0A0B4J268 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TRAV4A0A0B4J268 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC15.96■□□□□ 0.15
TRAV4A0A0B4J268 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
TRAV4A0A0B4J268 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TRAV4A0A0B4J268 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC15.96■□□□□ 0.15
TRAV4A0A0B4J268 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV4A0A0B4J268 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms