Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.31■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.3■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.3■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 DUSP8P3-201ENST00000399571 1760 ntBASIC20.3■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.29■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.29■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.28■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 LINC01529-204ENST00000636474 1715 ntBASIC20.28■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 AL353803.4-201ENST00000565882 1934 ntBASIC20.28■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.28■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.28■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.28■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.28■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.27■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.27■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.27■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.27■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.27■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 SRD5A1P1-201ENST00000442297 786 ntBASIC20.27■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.27■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.26■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.26■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 DUX4L4-201ENST00000566884 1269 ntBASIC20.26■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.26■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.26■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.25■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 AC241377.3-202ENST00000626088 1088 ntBASIC20.25■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 AC241585.3-202ENST00000628937 1088 ntBASIC20.25■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 AC245100.8-202ENST00000629247 1058 ntBASIC20.25■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.25■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.24■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.24■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.24■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.24■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.23■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.23■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.22■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.22■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TNFSF12-TNFSF13A0A0A6YY99 AC133561.4-201ENST00000566112 224 ntBASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms