Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC16.74■□□□□ 0.27
PDE6BP35913 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC16.74■□□□□ 0.27
PDE6BP35913 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PDE6BP35913 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
PDE6BP35913 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC16.74■□□□□ 0.27
PDE6BP35913 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC16.74■□□□□ 0.27
PDE6BP35913 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PDE6BP35913 RN7SL4P-201ENST00000584058 295 ntBASIC16.74■□□□□ 0.27
PDE6BP35913 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC16.74■□□□□ 0.27
PDE6BP35913 AC211476.2-201ENST00000608799 708 ntBASIC16.74■□□□□ 0.27
PDE6BP35913 GOLGA8IP-202ENST00000611635 2100 ntBASIC16.74■□□□□ 0.27
PDE6BP35913 AL109954.3-201ENST00000615088 558 ntBASIC16.74■□□□□ 0.27
PDE6BP35913 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDE6BP35913 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDE6BP35913 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDE6BP35913 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDE6BP35913 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDE6BP35913 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDE6BP35913 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDE6BP35913 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
PDE6BP35913 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDE6BP35913 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDE6BP35913 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDE6BP35913 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDE6BP35913 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PDE6BP35913 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.74■□□□□ 0.27
PDE6BP35913 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PDE6BP35913 AC139749.1-202ENST00000617529 3139 ntBASIC16.74■□□□□ 0.27
PDE6BP35913 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC16.74■□□□□ 0.27
PDE6BP35913 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PDE6BP35913 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDE6BP35913 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PDE6BP35913 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDE6BP35913 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PDE6BP35913 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDE6BP35913 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDE6BP35913 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDE6BP35913 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PDE6BP35913 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDE6BP35913 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC16.73■□□□□ 0.27
PDE6BP35913 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDE6BP35913 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDE6BP35913 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PDE6BP35913 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDE6BP35913 AP000437.1-201ENST00000624057 2085 ntBASIC16.73■□□□□ 0.27
PDE6BP35913 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDE6BP35913 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PDE6BP35913 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC16.73■□□□□ 0.27
PDE6BP35913 DDC-212ENST00000615193 1674 ntTSL 3 BASIC16.73■□□□□ 0.27
PDE6BP35913 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.73■□□□□ 0.27
PDE6BP35913 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDE6BP35913 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDE6BP35913 KRT8P6-201ENST00000399259 1207 ntBASIC16.73■□□□□ 0.27
PDE6BP35913 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC16.73■□□□□ 0.27
PDE6BP35913 GAPDHP29-201ENST00000429913 985 ntBASIC16.73■□□□□ 0.27
PDE6BP35913 SLC25A15P1-201ENST00000456738 342 ntBASIC16.73■□□□□ 0.27
PDE6BP35913 CETN3-205ENST00000522842 664 ntTSL 2 BASIC16.73■□□□□ 0.27
PDE6BP35913 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC16.73■□□□□ 0.27
PDE6BP35913 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PDE6BP35913 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PDE6BP35913 AL031768.1-201ENST00000606542 701 ntBASIC16.73■□□□□ 0.27
PDE6BP35913 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC16.73■□□□□ 0.27
PDE6BP35913 AC117500.5-201ENST00000623233 527 ntBASIC16.73■□□□□ 0.27
PDE6BP35913 Z82244.2-201ENST00000632196 448 ntBASIC16.73■□□□□ 0.27
PDE6BP35913 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDE6BP35913 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDE6BP35913 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDE6BP35913 MKRN7P-201ENST00000433469 1371 ntBASIC16.73■□□□□ 0.27
PDE6BP35913 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
PDE6BP35913 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PDE6BP35913 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC16.73■□□□□ 0.27
PDE6BP35913 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDE6BP35913 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC16.73■□□□□ 0.27
PDE6BP35913 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PDE6BP35913 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.73■□□□□ 0.27
PDE6BP35913 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDE6BP35913 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PDE6BP35913 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.73■□□□□ 0.27
PDE6BP35913 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PDE6BP35913 ERG-211ENST00000453032 1595 ntTSL 2 BASIC16.72■□□□□ 0.27
PDE6BP35913 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PDE6BP35913 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC16.72■□□□□ 0.27
PDE6BP35913 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDE6BP35913 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.72■□□□□ 0.27
PDE6BP35913 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDE6BP35913 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDE6BP35913 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.72■□□□□ 0.27
PDE6BP35913 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC16.72■□□□□ 0.27
PDE6BP35913 AC012358.2-201ENST00000430010 1434 ntBASIC16.72■□□□□ 0.27
PDE6BP35913 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PDE6BP35913 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDE6BP35913 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDE6BP35913 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDE6BP35913 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDE6BP35913 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDE6BP35913 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.72■□□□□ 0.27
PDE6BP35913 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PDE6BP35913 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDE6BP35913 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDE6BP35913 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms