Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.45□□□□□ -0.42
PARPBPQ9NWS1 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PARPBPQ9NWS1 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
PARPBPQ9NWS1 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
PARPBPQ9NWS1 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.45□□□□□ -0.42
PARPBPQ9NWS1 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PARPBPQ9NWS1 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.45□□□□□ -0.42
PARPBPQ9NWS1 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
PARPBPQ9NWS1 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
PARPBPQ9NWS1 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PARPBPQ9NWS1 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PARPBPQ9NWS1 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
PARPBPQ9NWS1 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PARPBPQ9NWS1 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.45□□□□□ -0.42
PARPBPQ9NWS1 KRT8P43-201ENST00000406052 1458 ntBASIC12.45□□□□□ -0.42
PARPBPQ9NWS1 KRT8P19-201ENST00000551916 1455 ntBASIC12.45□□□□□ -0.42
PARPBPQ9NWS1 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PARPBPQ9NWS1 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
PARPBPQ9NWS1 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.45□□□□□ -0.42
PARPBPQ9NWS1 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PARPBPQ9NWS1 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC12.45□□□□□ -0.42
PARPBPQ9NWS1 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PARPBPQ9NWS1 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
PARPBPQ9NWS1 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC12.45□□□□□ -0.42
PARPBPQ9NWS1 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 TBC1D27-202ENST00000424239 1573 ntBASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 AC008620.2-201ENST00000510294 1569 ntBASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 RN7SL81P-201ENST00000493781 261 ntBASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 AC019193.1-201ENST00000506678 823 ntBASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PARPBPQ9NWS1 AC089987.1-201ENST00000551654 2209 ntBASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 HLA-DQB1-202ENST00000399079 1501 ntBASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 AC006372.4-201ENST00000624122 1543 ntBASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
PARPBPQ9NWS1 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms