Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC10.56□□□□□ -0.72
VGLL1Q99990 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
VGLL1Q99990 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
VGLL1Q99990 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC10.56□□□□□ -0.72
VGLL1Q99990 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VGLL1Q99990 GOLGA2P5-201ENST00000266746 2395 ntBASIC10.55□□□□□ -0.72
VGLL1Q99990 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VGLL1Q99990 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
VGLL1Q99990 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VGLL1Q99990 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
VGLL1Q99990 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC10.55□□□□□ -0.72
VGLL1Q99990 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC10.55□□□□□ -0.72
VGLL1Q99990 AMT-256ENST00000638063 1783 ntTSL 5 BASIC10.55□□□□□ -0.72
VGLL1Q99990 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
VGLL1Q99990 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
VGLL1Q99990 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VGLL1Q99990 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC10.55□□□□□ -0.72
VGLL1Q99990 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VGLL1Q99990 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
VGLL1Q99990 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VGLL1Q99990 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
VGLL1Q99990 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VGLL1Q99990 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC10.55□□□□□ -0.72
VGLL1Q99990 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VGLL1Q99990 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VGLL1Q99990 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
VGLL1Q99990 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VGLL1Q99990 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
VGLL1Q99990 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
VGLL1Q99990 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VGLL1Q99990 PARVG-202ENST00000415224 999 ntTSL 2 BASIC10.55□□□□□ -0.72
VGLL1Q99990 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC10.55□□□□□ -0.72
VGLL1Q99990 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC10.55□□□□□ -0.72
VGLL1Q99990 AL354877.1-201ENST00000424412 413 ntBASIC10.55□□□□□ -0.72
VGLL1Q99990 NME2P1-201ENST00000426182 414 ntBASIC10.55□□□□□ -0.72
VGLL1Q99990 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC10.55□□□□□ -0.72
VGLL1Q99990 POM121L10P-201ENST00000436994 1285 ntBASIC10.55□□□□□ -0.72
VGLL1Q99990 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC10.55□□□□□ -0.72
VGLL1Q99990 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC10.55□□□□□ -0.72
VGLL1Q99990 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
VGLL1Q99990 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC10.55□□□□□ -0.72
VGLL1Q99990 SCARNA21-201ENST00000517026 139 ntBASIC10.55□□□□□ -0.72
VGLL1Q99990 USB1-203ENST00000539737 1212 ntTSL 2 BASIC10.55□□□□□ -0.72
VGLL1Q99990 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC10.55□□□□□ -0.72
VGLL1Q99990 CR383656.12-201ENST00000549567 513 ntBASIC10.55□□□□□ -0.72
VGLL1Q99990 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VGLL1Q99990 ORC6-206ENST00000568364 888 ntTSL 5 BASIC10.55□□□□□ -0.72
VGLL1Q99990 AC008805.1-201ENST00000590892 364 ntBASIC10.55□□□□□ -0.72
VGLL1Q99990 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC10.55□□□□□ -0.72
VGLL1Q99990 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VGLL1Q99990 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
VGLL1Q99990 DUT-208ENST00000559540 1441 ntTSL 2 BASIC10.55□□□□□ -0.72
VGLL1Q99990 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VGLL1Q99990 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VGLL1Q99990 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
VGLL1Q99990 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VGLL1Q99990 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VGLL1Q99990 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC10.55□□□□□ -0.72
VGLL1Q99990 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VGLL1Q99990 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
VGLL1Q99990 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VGLL1Q99990 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
VGLL1Q99990 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
VGLL1Q99990 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VGLL1Q99990 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC10.55□□□□□ -0.72
VGLL1Q99990 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VGLL1Q99990 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
VGLL1Q99990 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
VGLL1Q99990 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
VGLL1Q99990 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC10.55□□□□□ -0.72
VGLL1Q99990 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VGLL1Q99990 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
VGLL1Q99990 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
VGLL1Q99990 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VGLL1Q99990 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VGLL1Q99990 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
VGLL1Q99990 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VGLL1Q99990 Z98885.3-201ENST00000624882 1757 ntBASIC10.54□□□□□ -0.72
VGLL1Q99990 PCDHB17P-202ENST00000623466 3066 ntBASIC10.54□□□□□ -0.72
VGLL1Q99990 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
VGLL1Q99990 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VGLL1Q99990 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC10.54□□□□□ -0.72
VGLL1Q99990 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
VGLL1Q99990 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
VGLL1Q99990 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VGLL1Q99990 Z98257.2-202ENST00000641138 1548 ntBASIC10.54□□□□□ -0.72
VGLL1Q99990 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VGLL1Q99990 AC093462.1-201ENST00000621167 1683 ntBASIC10.54□□□□□ -0.72
VGLL1Q99990 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
VGLL1Q99990 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VGLL1Q99990 MYO7A-201ENST00000409619 7106 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VGLL1Q99990 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
VGLL1Q99990 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC10.54□□□□□ -0.72
VGLL1Q99990 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VGLL1Q99990 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
VGLL1Q99990 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
VGLL1Q99990 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
VGLL1Q99990 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VGLL1Q99990 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VGLL1Q99990 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC10.54□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 173.4 ms