Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 GSDMC-201ENST00000276708 2714 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SVIPQ8NHG7 AP004289.1-201ENST00000436307 2205 ntBASIC8.11□□□□□ -1.11
SVIPQ8NHG7 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SVIPQ8NHG7 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SVIPQ8NHG7 HUWE1-202ENST00000262854 14739 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SVIPQ8NHG7 ITIH2-201ENST00000358415 3193 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SVIPQ8NHG7 CTAGE7P-201ENST00000435712 2436 ntBASIC8.11□□□□□ -1.11
SVIPQ8NHG7 PRICKLE1-205ENST00000548696 3635 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
SVIPQ8NHG7 PIWIL3-202ENST00000527701 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
SVIPQ8NHG7 EIF1AD-201ENST00000312234 2887 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SVIPQ8NHG7 TCF4-208ENST00000543082 2399 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SVIPQ8NHG7 COL4A6-210ENST00000621266 6627 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SVIPQ8NHG7 LINC01748-205ENST00000635616 2143 ntTSL 5 BASIC8.11□□□□□ -1.11
SVIPQ8NHG7 THPO-201ENST00000204615 1855 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
SVIPQ8NHG7 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SVIPQ8NHG7 PNPLA1-202ENST00000388715 2332 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SVIPQ8NHG7 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SVIPQ8NHG7 CAMK2D-203ENST00000379773 1642 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
SVIPQ8NHG7 PC-203ENST00000393960 4192 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
SVIPQ8NHG7 MPP4-208ENST00000447335 2050 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 AL355607.2-201ENST00000563268 1395 ntTSL 5 BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 LINC01568-207ENST00000641790 1380 ntBASIC8.1□□□□□ -1.11
SVIPQ8NHG7 PPIP5K1-205ENST00000381879 5487 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 AC104051.2-201ENST00000518934 2461 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 AC046168.1-201ENST00000561283 3814 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 LTBP1-204ENST00000407925 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 DMBT1-202ENST00000338354 7686 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 DMBT1-204ENST00000368909 7686 ntAPPRIS P4 TSL 5 BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 DMBT1-207ENST00000619379 7686 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 APP-201ENST00000346798 3467 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 DDHD1-203ENST00000395606 12769 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 ZNF594-202ENST00000575779 4335 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 MSL3-202ENST00000337339 3446 ntTSL 2 BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 CCIN-201ENST00000335119 1941 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 LIN52-205ENST00000555028 2776 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 AC105342.1-201ENST00000378334 6848 ntBASIC8.1□□□□□ -1.11
SVIPQ8NHG7 MYL2-201ENST00000228841 807 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 SSR2-201ENST00000295702 1116 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 AC016598.1-201ENST00000340585 560 ntTSL 4 BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 AC240504.1-201ENST00000395709 845 ntBASIC8.1□□□□□ -1.11
SVIPQ8NHG7 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 EEF1A1P31-201ENST00000415978 1131 ntBASIC8.1□□□□□ -1.11
SVIPQ8NHG7 AL445193.2-201ENST00000419596 620 ntTSL 3 BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 TRGV7-201ENST00000427089 353 ntBASIC8.1□□□□□ -1.11
SVIPQ8NHG7 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 ARHGAP22-IT1-201ENST00000505718 470 ntTSL 3 BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 AC090559.1-202ENST00000532943 851 ntTSL 3 BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 OR5AR1-201ENST00000624596 1026 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 AC005355.2-201ENST00000625064 484 ntBASIC8.1□□□□□ -1.11
SVIPQ8NHG7 TOB1-201ENST00000268957 1467 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 ALOX15P2-201ENST00000340858 1897 ntBASIC8.1□□□□□ -1.11
SVIPQ8NHG7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 ERBB2-218ENST00000584450 3730 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 CFAP69-201ENST00000389297 3902 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 PLA2G4C-219ENST00000599111 2458 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 PTCH1-203ENST00000375274 4720 ntTSL 5 BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 LINC01354-202ENST00000435574 2860 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 FOS-202ENST00000535987 1402 ntTSL 2 BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 RTCB-201ENST00000216038 2027 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 AURKA-207ENST00000395914 2238 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 CTCFL-209ENST00000433949 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 MUSK-201ENST00000189978 2408 ntTSL 5 BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 MUSK-204ENST00000374440 2408 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 TUBB-207ENST00000396384 2823 ntTSL 3 BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 CASP14-201ENST00000427043 3241 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 HIPK1-206ENST00000369559 3424 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 ESR2-208ENST00000554572 3588 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 POP4-202ENST00000585603 3385 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 MAGEC2-201ENST00000247452 1991 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 AC007787.1-201ENST00000588095 1583 ntBASIC8.1□□□□□ -1.11
SVIPQ8NHG7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SVIPQ8NHG7 ZNF473-201ENST00000270617 4688 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 TMEM106A-208ENST00000612339 3266 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 SPATA46-201ENST00000367935 1711 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SVIPQ8NHG7 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms