RNA–Protein interactions for RNA: ENST00000548696.6

PRICKLE1-205, Transcript of prickle planar cell polarity protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRICKLE1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-205ENST00000548696 NISCHQ9Y2I1 1504 aa20.65■□□□□ 0.9
PRICKLE1-205ENST00000548696 SHROOM4Q9ULL8 1493 aa18.97■□□□□ 0.63
PRICKLE1-205ENST00000548696 SUPT5HO00267 1087 aaKnown RBP18.83■□□□□ 0.61
PRICKLE1-205ENST00000548696 DCAF8L2P0C7V8 631 aa18.44■□□□□ 0.54
PRICKLE1-205ENST00000548696 PCGF6Q9BYE7 350 aa18.31■□□□□ 0.52
PRICKLE1-205ENST00000548696 PPARGC1BQ86YN6 1023 aaKnown RBP18.25■□□□□ 0.51
PRICKLE1-205ENST00000548696 HRCP23327 699 aa18.18■□□□□ 0.5
PRICKLE1-205ENST00000548696 CHIC1Q5VXU3 224 aa18.03■□□□□ 0.48
PRICKLE1-205ENST00000548696 MYO15BQ96JP2 1530 aa18.01■□□□□ 0.47
PRICKLE1-205ENST00000548696 LOC105371045A0A1W2PR82 267 aa17.92■□□□□ 0.46
PRICKLE1-205ENST00000548696 EHMT2Q96KQ7 1210 aa17.79■□□□□ 0.44
PRICKLE1-205ENST00000548696 FAM9AQ8IZU1 332 aaPredicted RBP17.56■□□□□ 0.4
PRICKLE1-205ENST00000548696 ZCCHC6Q5VYS8 1495 aaKnown RBP17.44■□□□□ 0.38
PRICKLE1-205ENST00000548696 TRIM26Q12899 539 aaPredicted RBP17.42■□□□□ 0.38
PRICKLE1-205ENST00000548696 TTBK1Q5TCY1 1321 aaPredicted RBP17.24■□□□□ 0.35
PRICKLE1-205ENST00000548696 DCAF1Q9Y4B6 1507 aa17.21■□□□□ 0.35
PRICKLE1-205ENST00000548696 SCAF1Q9H7N4 1312 aaKnown RBP17.21■□□□□ 0.35
PRICKLE1-205ENST00000548696 TRIM41Q8WV44 630 aa17.21■□□□□ 0.35
PRICKLE1-205ENST00000548696 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.07■□□□□ 0.32
PRICKLE1-205ENST00000548696 ZEB1P37275 1124 aaPredicted RBP17.03■□□□□ 0.32
PRICKLE1-205ENST00000548696 CCER1Q8TC90 406 aaPredicted RBP16.96■□□□□ 0.31
PRICKLE1-205ENST00000548696 PELP1Q8IZL8 1130 aaKnown RBP16.91■□□□□ 0.3
PRICKLE1-205ENST00000548696 CCDC180Q9P1Z9 1646 aa16.91■□□□□ 0.3
PRICKLE1-205ENST00000548696 NEUROD1Q13562 356 aa16.89■□□□□ 0.29
PRICKLE1-205ENST00000548696 YTHDC1Q96MU7 727 aaKnown RBP16.83■□□□□ 0.29
PRICKLE1-205ENST00000548696 GTF3C3Q9Y5Q9 886 aa16.82■□□□□ 0.28
PRICKLE1-205ENST00000548696 ACIN1Q9UKV3 1341 aaKnown RBP16.77■□□□□ 0.28
PRICKLE1-205ENST00000548696 DIEXFQ68CQ4 756 aaKnown RBP16.74■□□□□ 0.27
PRICKLE1-205ENST00000548696 RSF1Q96T23 1441 aaPredicted RBP16.7■□□□□ 0.26
PRICKLE1-205ENST00000548696 SCRIBQ14160 1630 aa16.66■□□□□ 0.26
PRICKLE1-205ENST00000548696 CENPBP07199 599 aaPredicted RBP16.63■□□□□ 0.25
PRICKLE1-205ENST00000548696 RB1CC1Q8TDY2 1594 aa16.63■□□□□ 0.25
PRICKLE1-205ENST00000548696 RANGAP1P46060 587 aaPredicted RBP16.56■□□□□ 0.24
PRICKLE1-205ENST00000548696 ABCC9O60706 1549 aa16.5■□□□□ 0.23
PRICKLE1-205ENST00000548696 HNRNPUL2Q1KMD3 747 aaKnown RBP16.5■□□□□ 0.23
PRICKLE1-205ENST00000548696 UBTFP17480 764 aaKnown RBP16.49■□□□□ 0.23
PRICKLE1-205ENST00000548696 CECR2Q9BXF3 1484 aa16.45■□□□□ 0.22
PRICKLE1-205ENST00000548696 MIER1Q8N108 512 aa16.38■□□□□ 0.21
PRICKLE1-205ENST00000548696 ZNF316A6NFI3 1004 aaPredicted RBP16.36■□□□□ 0.21
PRICKLE1-205ENST00000548696 MROH2BQ7Z745 1585 aa16.29■□□□□ 0.2
PRICKLE1-205ENST00000548696 WIZO95785 1651 aa16.21■□□□□ 0.19
PRICKLE1-205ENST00000548696 ABCC8Q09428 1581 aa16.21■□□□□ 0.19
PRICKLE1-205ENST00000548696 CEP162Q5TB80 1403 aa16.2■□□□□ 0.18
PRICKLE1-205ENST00000548696 SOGA1O94964 1423 aa16.19■□□□□ 0.18
PRICKLE1-205ENST00000548696 CCDC88BA6NC98 1476 aa16.18■□□□□ 0.18
PRICKLE1-205ENST00000548696 CSRNP3Q8WYN3 585 aa16.15■□□□□ 0.18
PRICKLE1-205ENST00000548696 PABPN1Q86U42 306 aaKnown RBP eCLIP16.14■□□□□ 0.17
PRICKLE1-205ENST00000548696 APLP2Q06481 763 aa16.13■□□□□ 0.17
PRICKLE1-205ENST00000548696 RUSC2Q8N2Y8 1516 aa16.12■□□□□ 0.17
PRICKLE1-205ENST00000548696 ITGAEP38570 1179 aa16.07■□□□□ 0.16
PRICKLE1-205ENST00000548696 BCANQ96GW7 911 aa16.06■□□□□ 0.16
PRICKLE1-205ENST00000548696 MYT1Q01538 1121 aa16.05■□□□□ 0.16
PRICKLE1-205ENST00000548696 TNIKQ9UKE5 1360 aa15.96■□□□□ 0.15
PRICKLE1-205ENST00000548696 KCNH8Q96L42 1107 aa15.92■□□□□ 0.14
PRICKLE1-205ENST00000548696 SUPT16HQ9Y5B9 1047 aaKnown RBP15.92■□□□□ 0.14
PRICKLE1-205ENST00000548696 WRNQ14191 1432 aaPredicted RBP eCLIP15.91■□□□□ 0.14
PRICKLE1-205ENST00000548696 CLIP1P30622 1438 aa15.84■□□□□ 0.13
PRICKLE1-205ENST00000548696 HIRIP3Q9BW71 556 aaPredicted RBP15.83■□□□□ 0.12
PRICKLE1-205ENST00000548696 BAZ1AQ9NRL2 1556 aaPredicted RBP15.81■□□□□ 0.12
PRICKLE1-205ENST00000548696 GOLGA3Q08378 1498 aa15.81■□□□□ 0.12
PRICKLE1-205ENST00000548696 TSHZ2Q9NRE2 1034 aa15.78■□□□□ 0.12
PRICKLE1-205ENST00000548696 KANK4Q5T7N3 995 aaPredicted RBP15.77■□□□□ 0.12
PRICKLE1-205ENST00000548696 FKBP8Q14318 412 aa15.74■□□□□ 0.11
PRICKLE1-205ENST00000548696 ATP1B4Q9UN42 357 aaPredicted RBP15.73■□□□□ 0.11
PRICKLE1-205ENST00000548696 NACADO15069 1562 aa15.73■□□□□ 0.11
PRICKLE1-205ENST00000548696 DDX10Q13206 875 aaKnown RBP15.73■□□□□ 0.11
PRICKLE1-205ENST00000548696 EIF4G1Q04637 1599 aaKnown RBP15.71■□□□□ 0.11
PRICKLE1-205ENST00000548696 TRIM52Q96A61 297 aa15.7■□□□□ 0.1
PRICKLE1-205ENST00000548696 SMARCA2P51531 1590 aa15.7■□□□□ 0.1
PRICKLE1-205ENST00000548696 TOP2AP11388 1531 aaKnown RBP15.68■□□□□ 0.1
PRICKLE1-205ENST00000548696 RAPGEF2Q9Y4G8 1499 aa15.68■□□□□ 0.1
PRICKLE1-205ENST00000548696 DHX57Q6P158 1386 aaKnown RBP15.66■□□□□ 0.1
PRICKLE1-205ENST00000548696 VPS8Q8N3P4 1428 aa15.65■□□□□ 0.1
PRICKLE1-205ENST00000548696 EEA1Q15075 1411 aa15.64■□□□□ 0.09
PRICKLE1-205ENST00000548696 SIN3AQ96ST3 1273 aa15.63■□□□□ 0.09
PRICKLE1-205ENST00000548696 ANP32EQ9BTT0 268 aa15.63■□□□□ 0.09
PRICKLE1-205ENST00000548696 CEP164Q9UPV0 1460 aa15.63■□□□□ 0.09
PRICKLE1-205ENST00000548696 SMARCA4P51532 1647 aa15.6■□□□□ 0.09
PRICKLE1-205ENST00000548696 IRX6P78412 446 aaPredicted RBP15.59■□□□□ 0.09
PRICKLE1-205ENST00000548696 FAM50AQ14320 339 aaKnown RBP15.59■□□□□ 0.09
PRICKLE1-205ENST00000548696 P3H3Q8IVL6 736 aa15.58■□□□□ 0.08
PRICKLE1-205ENST00000548696 NEFLP07196 543 aa15.56■□□□□ 0.08
PRICKLE1-205ENST00000548696 SYNJ1O43426 1573 aa15.54■□□□□ 0.08
PRICKLE1-205ENST00000548696 BCL11AQ9H165 835 aa15.53■□□□□ 0.08
PRICKLE1-205ENST00000548696 CNGB1Q14028 1251 aaPredicted RBP15.5■□□□□ 0.07
PRICKLE1-205ENST00000548696 KIF21BO75037 1637 aa15.5■□□□□ 0.07
PRICKLE1-205ENST00000548696 RBM19Q9Y4C8 960 aaKnown RBP15.48■□□□□ 0.07
PRICKLE1-205ENST00000548696 RAB3GAP2Q9H2M9 1393 aa15.42■□□□□ 0.06
PRICKLE1-205ENST00000548696 CLSPNQ9HAW4 1339 aa15.42■□□□□ 0.06
PRICKLE1-205ENST00000548696 CCNB3Q8WWL7 1395 aa15.41■□□□□ 0.06
PRICKLE1-205ENST00000548696 SENP3-EIF4A1A0A087X0R7 540 aa15.4■□□□□ 0.06
PRICKLE1-205ENST00000548696 ANP32CO43423 234 aa15.4■□□□□ 0.06
PRICKLE1-205ENST00000548696 ARAP1Q96P48 1450 aa15.38■□□□□ 0.05
PRICKLE1-205ENST00000548696 ERICH6Q7L0X2 663 aa15.37■□□□□ 0.05
PRICKLE1-205ENST00000548696 HNRNPUQ00839 825 aaKnown RBP eCLIP15.36■□□□□ 0.05
PRICKLE1-205ENST00000548696 BAZ1BQ9UIG0 1483 aaKnown RBP15.31■□□□□ 0.04
PRICKLE1-205ENST00000548696 MSH5O43196 834 aa15.3■□□□□ 0.04
PRICKLE1-205ENST00000548696 WDR97A6NE52 1622 aa15.27■□□□□ 0.04
PRICKLE1-205ENST00000548696 PPP1R15AO75807 674 aaPredicted RBP15.26■□□□□ 0.03
PRICKLE1-205ENST00000548696 UNC13AQ9UPW8 1703 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms