RNA–Protein interactions for RNA: ENST00000555028.5

LIN52-205, Transcript of lin-52 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN52, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN52-205ENST00000555028 AEBP2Q6ZN18 517 aaPredicted RBP21.87■■□□□ 1.09
LIN52-205ENST00000555028 CHIC1Q5VXU3 224 aa20.94■□□□□ 0.94
LIN52-205ENST00000555028 NISCHQ9Y2I1 1504 aa20.74■□□□□ 0.91
LIN52-205ENST00000555028 SENP3Q9H4L4 574 aaPredicted RBP18.51■□□□□ 0.55
LIN52-205ENST00000555028 PHF23Q9BUL5 403 aaPredicted RBP18.43■□□□□ 0.54
LIN52-205ENST00000555028 CCDC180Q9P1Z9 1646 aa17.73■□□□□ 0.43
LIN52-205ENST00000555028 SHROOM4Q9ULL8 1493 aa17.58■□□□□ 0.4
LIN52-205ENST00000555028 ZCCHC6Q5VYS8 1495 aaKnown RBP17.48■□□□□ 0.39
LIN52-205ENST00000555028 DCAF8L2P0C7V8 631 aa17.38■□□□□ 0.37
LIN52-205ENST00000555028 FOXD1Q16676 465 aa17.28■□□□□ 0.36
LIN52-205ENST00000555028 SUPT5HO00267 1087 aaKnown RBP17.11■□□□□ 0.33
LIN52-205ENST00000555028 DCAF1Q9Y4B6 1507 aa16.98■□□□□ 0.31
LIN52-205ENST00000555028 PLPPR3Q6T4P5 718 aa16.82■□□□□ 0.28
LIN52-205ENST00000555028 ABCC9O60706 1549 aa16.74■□□□□ 0.27
LIN52-205ENST00000555028 SCRIBQ14160 1630 aa16.64■□□□□ 0.25
LIN52-205ENST00000555028 MYO15BQ96JP2 1530 aa16.57■□□□□ 0.24
LIN52-205ENST00000555028 NACADO15069 1562 aa16.47■□□□□ 0.23
LIN52-205ENST00000555028 PPP6R1Q9UPN7 881 aa16.4■□□□□ 0.22
LIN52-205ENST00000555028 ADRA2BP18089 450 aa16.34■□□□□ 0.21
LIN52-205ENST00000555028 RSF1Q96T23 1441 aaPredicted RBP16.33■□□□□ 0.2
LIN52-205ENST00000555028 RB1CC1Q8TDY2 1594 aa16.27■□□□□ 0.19
LIN52-205ENST00000555028 CECR2Q9BXF3 1484 aa16.24■□□□□ 0.19
LIN52-205ENST00000555028 PIAS4Q8N2W9 510 aaPredicted RBP16.2■□□□□ 0.18
LIN52-205ENST00000555028 MROH2BQ7Z745 1585 aa16.14■□□□□ 0.17
LIN52-205ENST00000555028 PCGF6Q9BYE7 350 aa16.12■□□□□ 0.17
LIN52-205ENST00000555028 LOC105371045A0A1W2PR82 267 aa16.08■□□□□ 0.16
LIN52-205ENST00000555028 HRCP23327 699 aa16.07■□□□□ 0.16
LIN52-205ENST00000555028 UNC13AQ9UPW8 1703 aa16.05■□□□□ 0.16
LIN52-205ENST00000555028 WIZO95785 1651 aa16.04■□□□□ 0.16
LIN52-205ENST00000555028 MSH5O43196 834 aa15.99■□□□□ 0.15
LIN52-205ENST00000555028 PABPN1Q86U42 306 aaKnown RBP eCLIP15.98■□□□□ 0.15
LIN52-205ENST00000555028 BAZ1AQ9NRL2 1556 aaPredicted RBP15.95■□□□□ 0.14
LIN52-205ENST00000555028 PPARGC1BQ86YN6 1023 aaKnown RBP15.93■□□□□ 0.14
LIN52-205ENST00000555028 TRIM41Q8WV44 630 aa15.92■□□□□ 0.14
LIN52-205ENST00000555028 SMARCA4P51532 1647 aa15.85■□□□□ 0.13
LIN52-205ENST00000555028 BICRAQ9NZM4 1560 aa15.85■□□□□ 0.13
LIN52-205ENST00000555028 FAM9AQ8IZU1 332 aaPredicted RBP15.84■□□□□ 0.13
LIN52-205ENST00000555028 TOP2AP11388 1531 aaKnown RBP15.75■□□□□ 0.11
LIN52-205ENST00000555028 EHMT2Q96KQ7 1210 aa15.75■□□□□ 0.11
LIN52-205ENST00000555028 CCDC88BA6NC98 1476 aa15.71■□□□□ 0.11
LIN52-205ENST00000555028 SMARCA2P51531 1590 aa15.67■□□□□ 0.1
LIN52-205ENST00000555028 EIF4G1Q04637 1599 aaKnown RBP15.66■□□□□ 0.1
LIN52-205ENST00000555028 TRIM26Q12899 539 aaPredicted RBP15.63■□□□□ 0.09
LIN52-205ENST00000555028 ABCC8Q09428 1581 aa15.6■□□□□ 0.09
LIN52-205ENST00000555028 PEG3Q9GZU2 1588 aa15.53■□□□□ 0.08
LIN52-205ENST00000555028 ATAD2BQ9ULI0 1458 aa15.52■□□□□ 0.08
LIN52-205ENST00000555028 BAZ1BQ9UIG0 1483 aaKnown RBP15.47■□□□□ 0.07
LIN52-205ENST00000555028 SOGA1O94964 1423 aa15.4■□□□□ 0.06
LIN52-205ENST00000555028 RUSC2Q8N2Y8 1516 aa15.35■□□□□ 0.05
LIN52-205ENST00000555028 WRNQ14191 1432 aaPredicted RBP eCLIP15.35■□□□□ 0.05
LIN52-205ENST00000555028 SYNJ1O43426 1573 aa15.29■□□□□ 0.04
LIN52-205ENST00000555028 CSRNP3Q8WYN3 585 aa15.28■□□□□ 0.04
LIN52-205ENST00000555028 NCAPD3P42695 1498 aa15.25■□□□□ 0.03
LIN52-205ENST00000555028 POTEDQ86YR6 584 aa15.24■□□□□ 0.03
LIN52-205ENST00000555028 UBTFP17480 764 aaKnown RBP15.23■□□□□ 0.03
LIN52-205ENST00000555028 ZEB1P37275 1124 aaPredicted RBP15.22■□□□□ 0.03
LIN52-205ENST00000555028 HMGXB3Q12766 1538 aa15.21■□□□□ 0.03
LIN52-205ENST00000555028 EEA1Q15075 1411 aa15.2■□□□□ 0.02
LIN52-205ENST00000555028 CEP162Q5TB80 1403 aa15.18■□□□□ 0.02
LIN52-205ENST00000555028 TTBK1Q5TCY1 1321 aaPredicted RBP15.17■□□□□ 0.02
LIN52-205ENST00000555028 TNIKQ9UKE5 1360 aa15.16■□□□□ 0.02
LIN52-205ENST00000555028 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.15■□□□□ 0.02
LIN52-205ENST00000555028 GOLGA3Q08378 1498 aa15.12■□□□□ 0.01
LIN52-205ENST00000555028 TOP2BQ02880 1626 aa15.09■□□□□ 0.01
LIN52-205ENST00000555028 CEP164Q9UPV0 1460 aa15.06■□□□□ 0
LIN52-205ENST00000555028 CFTRP13569 1480 aa15.06■□□□□ 0
LIN52-205ENST00000555028 RANGAP1P46060 587 aaPredicted RBP15.05■□□□□ 0
LIN52-205ENST00000555028 CC2D2AQ9P2K1 1620 aa15.04■□□□□ -0
LIN52-205ENST00000555028 BIVM-ERCC5R4GMW8 1640 aa15.04■□□□□ -0
LIN52-205ENST00000555028 CUX1P39880 1505 aa15.04■□□□□ -0
LIN52-205ENST00000555028 CCER1Q8TC90 406 aaPredicted RBP15.03■□□□□ -0
LIN52-205ENST00000555028 RAPGEF2Q9Y4G8 1499 aa15.03■□□□□ -0
LIN52-205ENST00000555028 KIF21BO75037 1637 aa15.03■□□□□ -0
LIN52-205ENST00000555028 CLIP1P30622 1438 aa14.96□□□□□ -0.01
LIN52-205ENST00000555028 CADPSQ9ULU8 1353 aa14.96□□□□□ -0.01
LIN52-205ENST00000555028 SCAF1Q9H7N4 1312 aaKnown RBP14.96□□□□□ -0.02
LIN52-205ENST00000555028 MAPK8IP2Q13387 824 aaPredicted RBP14.94□□□□□ -0.02
LIN52-205ENST00000555028 PRDM2Q13029 1718 aa14.9□□□□□ -0.02
LIN52-205ENST00000555028 KIF27Q86VH2 1401 aa14.89□□□□□ -0.03
LIN52-205ENST00000555028 PRXQ9BXM0 1461 aa14.88□□□□□ -0.03
LIN52-205ENST00000555028 VPS8Q8N3P4 1428 aa14.84□□□□□ -0.03
LIN52-205ENST00000555028 DNAJC5BQ9UF47 199 aa14.84□□□□□ -0.03
LIN52-205ENST00000555028 NESP48681 1621 aa14.84□□□□□ -0.03
LIN52-205ENST00000555028 CUX2O14529 1486 aa14.83□□□□□ -0.04
LIN52-205ENST00000555028 ERICH3Q5RHP9 1530 aa14.83□□□□□ -0.04
LIN52-205ENST00000555028 FANCD2Q9BXW9 1451 aa14.82□□□□□ -0.04
LIN52-205ENST00000555028 FGD5Q6ZNL6 1462 aa14.81□□□□□ -0.04
LIN52-205ENST00000555028 PPP4R3CPQ6ZMV5 832 aa14.8□□□□□ -0.04
LIN52-205ENST00000555028 APLP2Q06481 763 aa14.79□□□□□ -0.04
LIN52-205ENST00000555028 DIEXFQ68CQ4 756 aaKnown RBP14.78□□□□□ -0.04
LIN52-205ENST00000555028 IGF1RP08069 1367 aa14.77□□□□□ -0.05
LIN52-205ENST00000555028 NEUROD1Q13562 356 aa14.76□□□□□ -0.05
LIN52-205ENST00000555028 ARAP1Q96P48 1450 aa14.75□□□□□ -0.05
LIN52-205ENST00000555028 HNRNPUL2Q1KMD3 747 aaKnown RBP14.74□□□□□ -0.05
LIN52-205ENST00000555028 DMRT2Q9Y5R5 561 aa14.73□□□□□ -0.05
LIN52-205ENST00000555028 RAD54L2Q9Y4B4 1467 aa14.73□□□□□ -0.05
LIN52-205ENST00000555028 CARMIL1Q5VZK9 1371 aa14.7□□□□□ -0.06
LIN52-205ENST00000555028 ACIN1Q9UKV3 1341 aaKnown RBP14.7□□□□□ -0.06
LIN52-205ENST00000555028 TOPBP1Q92547 1522 aa14.69□□□□□ -0.06
LIN52-205ENST00000555028 DNMBPQ6XZF7 1577 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms