RNA–Protein interactions for RNA: ENST00000407925.5

LTBP1-204, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP1, Length 5,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-204ENST00000407925 DCAF8L2P0C7V8 631 aa18.09■□□□□ 0.49
LTBP1-204ENST00000407925 PELP1Q8IZL8 1130 aaKnown RBP17.34■□□□□ 0.37
LTBP1-204ENST00000407925 SUPT5HO00267 1087 aaKnown RBP17.16■□□□□ 0.34
LTBP1-204ENST00000407925 APLP2Q06481 763 aa16.89■□□□□ 0.29
LTBP1-204ENST00000407925 FAM9AQ8IZU1 332 aaPredicted RBP16.84■□□□□ 0.29
LTBP1-204ENST00000407925 NISCHQ9Y2I1 1504 aa16.84■□□□□ 0.29
LTBP1-204ENST00000407925 SHROOM4Q9ULL8 1493 aa16.61■□□□□ 0.25
LTBP1-204ENST00000407925 CCER1Q8TC90 406 aaPredicted RBP16.55■□□□□ 0.24
LTBP1-204ENST00000407925 EHMT2Q96KQ7 1210 aa16.48■□□□□ 0.23
LTBP1-204ENST00000407925 CENPBP07199 599 aaPredicted RBP16.41■□□□□ 0.22
LTBP1-204ENST00000407925 ERICH6Q7L0X2 663 aa16.41■□□□□ 0.22
LTBP1-204ENST00000407925 ZEB1P37275 1124 aaPredicted RBP16.4■□□□□ 0.22
LTBP1-204ENST00000407925 MYT1Q01538 1121 aa16.17■□□□□ 0.18
LTBP1-204ENST00000407925 PCGF6Q9BYE7 350 aa16.15■□□□□ 0.18
LTBP1-204ENST00000407925 NEFLP07196 543 aa16.13■□□□□ 0.17
LTBP1-204ENST00000407925 TRIM41Q8WV44 630 aa16.05■□□□□ 0.16
LTBP1-204ENST00000407925 TTBK1Q5TCY1 1321 aaPredicted RBP16.01■□□□□ 0.15
LTBP1-204ENST00000407925 ATP1B4Q9UN42 357 aaPredicted RBP15.97■□□□□ 0.15
LTBP1-204ENST00000407925 UBTFP17480 764 aaKnown RBP15.93■□□□□ 0.14
LTBP1-204ENST00000407925 RANGAP1P46060 587 aaPredicted RBP15.88■□□□□ 0.13
LTBP1-204ENST00000407925 DAXXQ9UER7 740 aaPredicted RBP15.75■□□□□ 0.11
LTBP1-204ENST00000407925 YTHDC1Q96MU7 727 aaKnown RBP15.67■□□□□ 0.1
LTBP1-204ENST00000407925 TRIM26Q12899 539 aaPredicted RBP15.6■□□□□ 0.09
LTBP1-204ENST00000407925 MYT1LQ9UL68 1186 aa15.51■□□□□ 0.07
LTBP1-204ENST00000407925 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.45■□□□□ 0.06
LTBP1-204ENST00000407925 HNRNPUL2Q1KMD3 747 aaKnown RBP15.45■□□□□ 0.06
LTBP1-204ENST00000407925 POLR3GLQ9BT43 218 aa15.39■□□□□ 0.05
LTBP1-204ENST00000407925 HRCP23327 699 aa15.36■□□□□ 0.05
LTBP1-204ENST00000407925 RTL5Q5HYW3 569 aaPredicted RBP15.34■□□□□ 0.05
LTBP1-204ENST00000407925 ITGAEP38570 1179 aa15.32■□□□□ 0.04
LTBP1-204ENST00000407925 ZNF316A6NFI3 1004 aaPredicted RBP15.31■□□□□ 0.04
LTBP1-204ENST00000407925 PPARGC1BQ86YN6 1023 aaKnown RBP15.26■□□□□ 0.03
LTBP1-204ENST00000407925 CLSPNQ9HAW4 1339 aa15.26■□□□□ 0.03
LTBP1-204ENST00000407925 SLC4A1APQ9BWU0 796 aaKnown RBP15.19■□□□□ 0.02
LTBP1-204ENST00000407925 ZBTB47Q9UFB7 747 aaPredicted RBP15.12■□□□□ 0.01
LTBP1-204ENST00000407925 CHIC1Q5VXU3 224 aa15.09■□□□□ 0.01
LTBP1-204ENST00000407925 DIEXFQ68CQ4 756 aaKnown RBP15.07■□□□□ 0
LTBP1-204ENST00000407925 CNGB1Q14028 1251 aaPredicted RBP15.04■□□□□ -0
LTBP1-204ENST00000407925 TRIM52Q96A61 297 aa15.02■□□□□ -0
LTBP1-204ENST00000407925 FAM50AQ14320 339 aaKnown RBP15.01□□□□□ -0.01
LTBP1-204ENST00000407925 LOC105371045A0A1W2PR82 267 aa14.98□□□□□ -0.01
LTBP1-204ENST00000407925 ANP32CO43423 234 aa14.98□□□□□ -0.01
LTBP1-204ENST00000407925 NEFMP07197 916 aa14.96□□□□□ -0.01
LTBP1-204ENST00000407925 CDK11AQ9UQ88 783 aaPredicted RBP14.96□□□□□ -0.01
LTBP1-204ENST00000407925 CANXP27824 592 aaKnown RBP14.86□□□□□ -0.03
LTBP1-204ENST00000407925 NEUROD1Q13562 356 aa14.84□□□□□ -0.03
LTBP1-204ENST00000407925 ZNF326Q5BKZ1 582 aaKnown RBP14.77□□□□□ -0.04
LTBP1-204ENST00000407925 ANP32AP39687 249 aaKnown RBP14.76□□□□□ -0.05
LTBP1-204ENST00000407925 ANP32BQ92688 251 aaKnown RBP14.73□□□□□ -0.05
LTBP1-204ENST00000407925 SLC24A1O60721 1099 aa14.69□□□□□ -0.06
LTBP1-204ENST00000407925 GTF3C3Q9Y5Q9 886 aa14.69□□□□□ -0.06
LTBP1-204ENST00000407925 BCANQ96GW7 911 aa14.68□□□□□ -0.06
LTBP1-204ENST00000407925 UPF2Q9HAU5 1272 aaKnown RBP14.64□□□□□ -0.07
LTBP1-204ENST00000407925 FBLN2P98095 1184 aa14.62□□□□□ -0.07
LTBP1-204ENST00000407925 ESF1Q9H501 851 aaKnown RBP14.61□□□□□ -0.07
LTBP1-204ENST00000407925 HSP90AA1P07900 732 aaKnown RBP14.57□□□□□ -0.08
LTBP1-204ENST00000407925 CSRNP3Q8WYN3 585 aa14.56□□□□□ -0.08
LTBP1-204ENST00000407925 PABPN1Q86U42 306 aaKnown RBP eCLIP14.55□□□□□ -0.08
LTBP1-204ENST00000407925 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.52□□□□□ -0.08
LTBP1-204ENST00000407925 ACIN1Q9UKV3 1341 aaKnown RBP14.52□□□□□ -0.09
LTBP1-204ENST00000407925 TONSLQ96HA7 1378 aa14.52□□□□□ -0.09
LTBP1-204ENST00000407925 ABCC9O60706 1549 aa14.5□□□□□ -0.09
LTBP1-204ENST00000407925 GLIPR1L2Q4G1C9 344 aa14.5□□□□□ -0.09
LTBP1-204ENST00000407925 BCL11AQ9H165 835 aa14.49□□□□□ -0.09
LTBP1-204ENST00000407925 STAG3Q9UJ98 1225 aa14.47□□□□□ -0.09
LTBP1-204ENST00000407925 ZNF777Q9ULD5 760 aaPredicted RBP14.47□□□□□ -0.09
LTBP1-204ENST00000407925 NPM1P06748 294 aaKnown RBP eCLIP14.45□□□□□ -0.1
LTBP1-204ENST00000407925 NPM2Q86SE8 214 aaKnown RBP14.44□□□□□ -0.1
LTBP1-204ENST00000407925 P3H3Q8IVL6 736 aa14.4□□□□□ -0.1
LTBP1-204ENST00000407925 HNRNPUQ00839 825 aaKnown RBP eCLIP14.37□□□□□ -0.11
LTBP1-204ENST00000407925 CHGAP10645 457 aaKnown RBP14.37□□□□□ -0.11
LTBP1-204ENST00000407925 FKBP8Q14318 412 aa14.36□□□□□ -0.11
LTBP1-204ENST00000407925 TMC1Q8TDI8 760 aa14.35□□□□□ -0.11
LTBP1-204ENST00000407925 WDR43Q15061 677 aaKnown RBP eCLIP14.35□□□□□ -0.11
LTBP1-204ENST00000407925 ANP32EQ9BTT0 268 aa14.34□□□□□ -0.11
LTBP1-204ENST00000407925 CDK11BP21127 795 aaKnown RBP14.34□□□□□ -0.11
LTBP1-204ENST00000407925 EIF5BO60841 1220 aaKnown RBP14.34□□□□□ -0.11
LTBP1-204ENST00000407925 CCDC136Q96JN2 1154 aa14.34□□□□□ -0.11
LTBP1-204ENST00000407925 MYH16Q9H6N6 1097 aa14.33□□□□□ -0.11
LTBP1-204ENST00000407925 ARID3CA6NKF2 412 aa14.31□□□□□ -0.12
LTBP1-204ENST00000407925 TSPY4P0CV99 314 aa14.31□□□□□ -0.12
LTBP1-204ENST00000407925 TSPY10P0CW01 314 aa14.31□□□□□ -0.12
LTBP1-204ENST00000407925 FAM9BQ8IZU0 186 aa14.28□□□□□ -0.12
LTBP1-204ENST00000407925 DDX10Q13206 875 aaKnown RBP14.24□□□□□ -0.13
LTBP1-204ENST00000407925 BECN1Q14457 450 aa14.24□□□□□ -0.13
LTBP1-204ENST00000407925 DDRGK1Q96HY6 314 aa14.24□□□□□ -0.13
LTBP1-204ENST00000407925 NCLP19338 710 aaKnown RBP14.23□□□□□ -0.13
LTBP1-204ENST00000407925 DCAF1Q9Y4B6 1507 aa14.22□□□□□ -0.13
LTBP1-204ENST00000407925 MRS2Q9HD23 443 aa14.22□□□□□ -0.13
LTBP1-204ENST00000407925 GOLGA6L22H0YM25 854 aa14.21□□□□□ -0.13
LTBP1-204ENST00000407925 MTUS2Q5JR59 1369 aa14.18□□□□□ -0.14
LTBP1-204ENST00000407925 CDCA8Q53HL2 280 aa14.17□□□□□ -0.14
LTBP1-204ENST00000407925 EIF4G2P78344 907 aaKnown RBP eCLIP14.16□□□□□ -0.14
LTBP1-204ENST00000407925 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.15□□□□□ -0.14
LTBP1-204ENST00000407925 CFAP53Q96M91 514 aa14.14□□□□□ -0.15
LTBP1-204ENST00000407925 TRIM44Q96DX7 344 aaPredicted RBP14.13□□□□□ -0.15
LTBP1-204ENST00000407925 SALL2Q9Y467 1007 aaPredicted RBP14.12□□□□□ -0.15
LTBP1-204ENST00000407925 RSF1Q96T23 1441 aaPredicted RBP14.12□□□□□ -0.15
LTBP1-204ENST00000407925 ZRSR1Q15695 479 aaKnown RBP14.11□□□□□ -0.15
LTBP1-204ENST00000407925 CASC1Q6TDU7 716 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms